RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 C16orf72Q14CZ0 275 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 KLHL35Q6PF15 583 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 PAOXQ6QHF9 649 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 RICTORQ6R327 1708 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 KRT25Q7Z3Z0 450 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 SMYD1Q8NB12 490 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 CCDC124Q96CT7 223 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 DGCR14Q96DF8 476 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 LIN28AQ9H9Z2 209 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 ARFGEF2Q9Y6D5 1785 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 FLT1P17948 1338 aa12.67□□□□□ -0.38
RBFOX1-208ENST00000547372 SLIT3O75094 1523 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 MYOCOSA0A1B0GUC4 107 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 USP17L3A6NCW0 530 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 USP17L4A6NCW7 530 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 DDAH1O94760 285 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TROVE2P10155 538 aaKnown RBP eCLIP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 CETPP11597 493 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 CDC16Q13042 620 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 PPP2R5EQ16537 467 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TMEM259Q4ZIN3 620 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 USP17L1Q7RTZ2 530 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 GPBP1Q86WP2 473 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 SLC15A3Q8IY34 581 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 SLC26A7Q8TE54 656 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 KRT35Q92764 455 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 KLF6Q99612 283 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 ROPN1BQ9BZX4 212 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 ROPN1Q9HAT0 212 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TAS2R1Q9NYW7 299 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 MAFGO15525 162 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 CDK4P11802 303 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 SERPINB6P35237 376 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 DMPKQ09013 629 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 ITGA7Q13683 1181 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 DHX34Q14147 1143 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 UBL4BQ8N7F7 174 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 RFWD2Q8NHY2 731 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 PPP2R3CQ969Q6 453 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 SELENONQ9NZV5 590 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 APPL1Q9UKG1 709 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 KIAA1024Q9UPX6 916 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 CLPTM1O96005 669 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 NAT1P18440 290 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 RPA3P35244 121 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 SERPINB8P50452 374 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 AP2B1P63010 937 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 RAPH1Q70E73 1250 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TTC7BQ86TV6 843 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TAB3Q8N5C8 712 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 AK8Q96MA6 479 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 TMEM109Q9BVC6 243 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 UMODL1Q5DID0 1318 aa12.66□□□□□ -0.38
RBFOX1-208ENST00000547372 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 PODXLO00592 558 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 ECE2O60344 883 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 UCHL3P15374 230 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 RGS2P41220 211 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 MTM1Q13496 603 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 OTOAQ7RTW8 1153 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 PRELID2Q8N945 189 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 HES6Q96HZ4 224 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 PPM1HQ9ULR3 514 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 BCS1LQ9Y276 419 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 STARD13Q9Y3M8 1113 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 GCNT3O95395 438 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 DLATP10515 647 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 RXRGP48443 463 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 ASPHQ12797 758 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 DLG1Q12959 904 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 COBLL1Q53SF7 1204 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 KLHDC10Q6PID8 442 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 ANO5Q75V66 913 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 ZBTB46Q86UZ6 589 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 CIDEBQ9UHD4 219 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 NUMBLQ9Y6R0 609 aa12.65□□□□□ -0.38
RBFOX1-208ENST00000547372 FOXD2O60548 495 aaPredicted RBP12.65□□□□□ -0.39
RBFOX1-208ENST00000547372 EPHB1P54762 984 aa12.65□□□□□ -0.39
RBFOX1-208ENST00000547372 USP17L2Q6R6M4 530 aa12.65□□□□□ -0.39
RBFOX1-208ENST00000547372 CLEC4GQ6UXB4 293 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms