RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 TRIM65Q6PJ69 517 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 CD302Q8IX05 232 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 TC2NQ8N9U0 490 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 EHBP1Q8NDI1 1231 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 RNPC3Q96LT9 517 aaKnown RBP18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 OSBPL7Q9BZF2 842 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 NXF3Q9H4D5 531 aaKnown RBP18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 ASB7Q9H672 318 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 SNTG2Q9NY99 539 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 CEP72Q9P209 647 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 LUC7L2Q9Y383 392 aaKnown RBP18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 COQ4Q9Y3A0 265 aa18.25■□□□□ 0.51
ARFGAP1-220ENST00000547204 LACTBL1A8MY62 500 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 MEFVO15553 781 aaPredicted RBP18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 NOL4O94818 638 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 C4BPAP04003 597 aaKnown RBP18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 ACTN1P12814 892 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZSCAN20P17040 1043 aaPredicted RBP18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 YARSP54577 528 aaKnown RBP18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 ADKP55263 362 aaKnown RBP18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 GOLGA8FQ08AF8 430 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 GOLGA8DPQ0D2H9 430 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 MBTPS1Q14703 1052 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZACNQ401N2 412 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 KLHDC7AQ5VTJ3 777 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 MFSD5Q6N075 450 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 LRRC8AQ8IWT6 810 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 FBXL13Q8NEE6 735 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 LMO3Q8TAP4 145 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 GANQ9H2C0 597 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 PLEKHA5Q9HAU0 1116 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 SIX2Q9NPC8 291 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 DAAM1Q9Y4D1 1078 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 IPPQ9Y573 584 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 TANC1Q9C0D5 1861 aa18.24■□□□□ 0.51
ARFGAP1-220ENST00000547204 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 KRT9P35527 623 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZBED6P86452 979 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 APBA1Q02410 837 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 BIRC3Q13489 604 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 DSC3Q14574 896 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 DUOXA2Q1HG44 320 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TDRD10Q5VZ19 366 aaKnown RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 CACNA2D4Q7Z3S7 1137 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 EFCAB13Q8IY85 973 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 SMG8Q8ND04 991 aaKnown RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZNF397Q8NF99 534 aaPredicted RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 FAM84AQ96KN4 292 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 SNX27Q96L92 541 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TMX1Q9H3N1 280 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 MTMR10Q9NXD2 777 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 FBXL5Q9UKA1 691 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 HES2Q9Y543 173 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 PCDHB2Q9Y5E7 798 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 CITO14578 2027 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 RECQL4O94761 1208 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TNNC2P02585 160 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TMEM191BP0C7N4 346 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 UCHL3P15374 230 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 PIK3CAP42336 1068 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 RAB27AP51159 221 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 POLR2FP61218 127 aaKnown RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TFAMQ00059 246 aaKnown RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 FAM109BQ6ICB4 259 aaPredicted RBP18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 JADE1Q6IE81 842 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 NT5DC4Q86YG4 428 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 HACE1Q8IYU2 909 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 SEMA4DQ92854 862 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 ANKRD36BP1Q96IX9 119 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 APOL6Q9BWW8 343 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 MTMR12Q9C0I1 747 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 KCNF1Q9H3M0 494 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 HIPK3Q9H422 1215 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 ABHD10Q9NUJ1 306 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 FAM105AQ9NUU6 356 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 RAB20Q9NX57 234 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 APEX2Q9UBZ4 518 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 C2CD2Q9Y426 696 aa18.23■□□□□ 0.51
ARFGAP1-220ENST00000547204 NRDCO43847 1150 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 PHACTR2O75167 634 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 HLA-DRAP01903 254 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 NFICP08651 508 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 RFX1P22670 979 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 SMAD3P84022 425 aaKnown RBP18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 PPIGQ13427 754 aaKnown RBP eCLIP18.22■□□□□ 0.511e-12■■□□□ 12.7
ARFGAP1-220ENST00000547204 TMEM132DQ14C87 1099 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 ZNF697Q5TEC3 545 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 TRAPPC11Q7Z392 1133 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 TMEM199Q8N511 208 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
ARFGAP1-220ENST00000547204 OR8K1Q8NGG5 319 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms