RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 TNFAIP3P21580 790 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 FGFR4P22455 802 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 SEZ6Q53EL9 994 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 TAS1R2Q8TE23 839 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 JAKMIP2Q96AA8 810 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 PGBD4Q96DM1 585 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 EIF3CLB5ME19 914 aaKnown RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 KIF5CO60282 957 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 CXCL8P10145 99 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 KRT5P13647 590 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 CLDN10P78369 228 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 MYO1EQ12965 1108 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 LHX8Q68G74 356 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 CRELD2Q6UXH1 353 aaPredicted RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 TRAPPC11Q7Z392 1133 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 ZSWIM2Q8NEG5 633 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 BAP1Q92560 729 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 RPS6KC1Q96S38 1066 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 EIF3CQ99613 913 aaKnown RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 SEPT11Q9NVA2 429 aaKnown RBP12□□□□□ -0.49
LINC00485-201ENST00000547179 C2CD2Q9Y426 696 aa12□□□□□ -0.49
LINC00485-201ENST00000547179 UTRNP46939 3433 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 EIF4A3P38919 411 aaKnown RBP11.99□□□□□ -0.49
LINC00485-201ENST00000547179 TNFSF9P41273 254 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 RBP5P82980 135 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 GCNT1Q02742 428 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 KIF5AQ12840 1032 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 LMBRD2Q68DH5 695 aaPredicted RBP11.99□□□□□ -0.49
LINC00485-201ENST00000547179 DHX38Q92620 1227 aaKnown RBP11.99□□□□□ -0.49
LINC00485-201ENST00000547179 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 APOL6Q9BWW8 343 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 NOL4O94818 638 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 CAP1Q01518 475 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 ZNF699Q32M78 642 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 ZNF667Q5HYK9 610 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 CD4P01730 458 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 C4BPAP04003 597 aaKnown RBP11.99□□□□□ -0.49
LINC00485-201ENST00000547179 ATICP31939 592 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 MAGEA1P43355 309 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 KCND1Q9NSA2 647 aa11.99□□□□□ -0.49
LINC00485-201ENST00000547179 UBQLN1Q9UMX0 589 aaKnown RBP11.99□□□□□ -0.49
LINC00485-201ENST00000547179 LACTBL1A8MY62 500 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 DCDC2CA8MYV0 355 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 ITGA4P13612 1032 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 KIF11P52732 1056 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 PTK2Q05397 1052 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 PLEKHO2Q8TD55 490 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 HAPLN2Q9GZV7 340 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 SLC38A7Q9NVC3 462 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 ITGA11Q9UKX5 1188 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 ST3GAL5Q9UNP4 418 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 NOC2LQ9Y3T9 749 aaKnown RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 ABLIM1O14639 778 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 EPHB6O15197 1021 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 EDN1P05305 212 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 PDE6CP51160 858 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 MAPK8IP2Q13387 824 aaPredicted RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 ZBTB41Q5SVQ8 909 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 PPP1R2P3Q6NXS1 205 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 FAXDC2Q96IV6 333 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 MTMR12Q9C0I1 747 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 UBN1Q9NPG3 1134 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 ADGRG1Q9Y653 693 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 F8VZ95 297 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 IQCF3P0C7M6 154 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 NOP14P78316 857 aaKnown RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 IFI16Q16666 785 aaKnown RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 C1orf220Q5T0J3 134 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 TDRD10Q5VZ19 366 aaKnown RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 CHP1Q99653 195 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 IFIH1Q9BYX4 1025 aaKnown RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 SENP6Q9GZR1 1112 aaPredicted RBP11.98□□□□□ -0.49
LINC00485-201ENST00000547179 CDHR5Q9HBB8 845 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 SIX2Q9NPC8 291 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 SPTLC3Q9NUV7 552 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 SCN10AQ9Y5Y9 1956 aa11.98□□□□□ -0.49
LINC00485-201ENST00000547179 PARNO95453 639 aaKnown RBP11.97□□□□□ -0.49
LINC00485-201ENST00000547179 CLCN1P35523 988 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 PRKCIP41743 596 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 TNNC1P63316 161 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 TMEM139Q8IV31 216 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 NIF3L1Q9GZT8 377 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 PAK6Q9NQU5 681 aaPredicted RBP11.97□□□□□ -0.49
LINC00485-201ENST00000547179 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
LINC00485-201ENST00000547179 LRRN2O75325 713 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 TNNT1P13805 278 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 NAP1L1P55209 391 aaKnown RBP11.97□□□□□ -0.49
LINC00485-201ENST00000547179 BMS1Q14692 1282 aaKnown RBP11.97□□□□□ -0.49
LINC00485-201ENST00000547179 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 C15orf39Q6ZRI6 1047 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 FAM228AQ86W67 206 aa11.97□□□□□ -0.49
LINC00485-201ENST00000547179 CEP120Q8N960 986 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms