RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 ADAM21Q9UKJ8 722 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 H3BRJ5 948 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 AP3B1O00203 1094 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 RTN2O75298 545 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 MAGEA9P43362 315 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 FRA10AC1Q70Z53 315 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 CD99L2Q8TCZ2 262 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 CENPKQ9BS16 269 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 GMNCA6NCL1 334 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 PQBP1O60828 265 aaKnown RBP11.01□□□□□ -0.65
SSH1-203ENST00000546433 TDP2O95551 362 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 SSTR3P32745 418 aaPredicted RBP11.01□□□□□ -0.65
SSH1-203ENST00000546433 STILQ15468 1287 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 SPRYD7Q5W111 196 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 AP1ARQ63HQ0 302 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 MAP3K14Q99558 947 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 RBAKQ9NYW8 714 aaPredicted RBP11.01□□□□□ -0.65
SSH1-203ENST00000546433 PPARGC1AQ9UBK2 798 aaKnown RBP11.01□□□□□ -0.65
SSH1-203ENST00000546433 ZFP69BQ9UJL9 534 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 TMEM247A6NEH6 219 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 GYG2O15488 501 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 SNX2O60749 519 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 KRT14P02533 472 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 NFRKBQ6P4R8 1299 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 AGPAT1Q99943 283 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 HEMGNQ9BXL5 484 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 TADA3O75528 432 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 SNRPFP62306 86 aaKnown RBP11.01□□□□□ -0.65
SSH1-203ENST00000546433 PDCLQ13371 301 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 PPIGQ13427 754 aaKnown RBP eCLIP11.01□□□□□ -0.65
SSH1-203ENST00000546433 DUOXA2Q1HG44 320 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 CCDC144BQ3MJ40 725 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 ZNF394Q53GI3 561 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 PASD1Q8IV76 773 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 ATP6V1G3Q96LB4 118 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 SLC13A4Q9UKG4 626 aa11.01□□□□□ -0.65
SSH1-203ENST00000546433 AGO2Q9UKV8 859 aaKnown RBP11.01□□□□□ -0.65
SSH1-203ENST00000546433 A0A0G2JND7 137 aa11□□□□□ -0.65
SSH1-203ENST00000546433 A0A1B0GTH6 734 aa11□□□□□ -0.65
SSH1-203ENST00000546433 SSU72P8A0A1W2PR75 194 aa11□□□□□ -0.65
SSH1-203ENST00000546433 CFLARO15519 480 aa11□□□□□ -0.65
SSH1-203ENST00000546433 RPSAP08865 295 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 AKR1B1P15121 316 aa11□□□□□ -0.65
SSH1-203ENST00000546433 IFNA8P32881 189 aa11□□□□□ -0.65
SSH1-203ENST00000546433 PPP4CP60510 307 aa11□□□□□ -0.65
SSH1-203ENST00000546433 C16orf86Q6ZW13 317 aa11□□□□□ -0.65
SSH1-203ENST00000546433 ZNF784Q8NCA9 323 aaPredicted RBP11□□□□□ -0.65
SSH1-203ENST00000546433 DACT3Q96B18 629 aaPredicted RBP11□□□□□ -0.65
SSH1-203ENST00000546433 UBE2OQ9C0C9 1292 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 DNAJC17Q9NVM6 304 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 SLC9A2Q9UBY0 812 aa11□□□□□ -0.65
SSH1-203ENST00000546433 RECQLP46063 649 aaPredicted RBP11□□□□□ -0.65
SSH1-203ENST00000546433 MAGOHP61326 146 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 CEP55Q53EZ4 464 aa11□□□□□ -0.65
SSH1-203ENST00000546433 CCDC137Q6PK04 289 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 ELOA2Q8IYF1 753 aaPredicted RBP11□□□□□ -0.65
SSH1-203ENST00000546433 ENTPD7Q9NQZ7 604 aa11□□□□□ -0.65
SSH1-203ENST00000546433 ZNF212Q9UDV6 495 aa11□□□□□ -0.65
SSH1-203ENST00000546433 TLL2Q9Y6L7 1015 aa11□□□□□ -0.65
SSH1-203ENST00000546433 EMSYQ7Z589 1322 aa11□□□□□ -0.65
SSH1-203ENST00000546433 TEX33O43247 280 aa11□□□□□ -0.65
SSH1-203ENST00000546433 HAUS5O94927 633 aa11□□□□□ -0.65
SSH1-203ENST00000546433 SCP2P22307 547 aa11□□□□□ -0.65
SSH1-203ENST00000546433 CDR2Q01850 454 aa11□□□□□ -0.65
SSH1-203ENST00000546433 RHPN2Q8IUC4 686 aa11□□□□□ -0.65
SSH1-203ENST00000546433 TRIM59Q8IWR1 403 aa11□□□□□ -0.65
SSH1-203ENST00000546433 SUCLA2Q9P2R7 463 aaPredicted RBP11□□□□□ -0.65
SSH1-203ENST00000546433 UVRAGQ9P2Y5 699 aa11□□□□□ -0.65
SSH1-203ENST00000546433 RPS6KA5O75582 802 aa11□□□□□ -0.65
SSH1-203ENST00000546433 HSPA1AP0DMV8 641 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 HSPA1BP0DMV9 641 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 OAZ1P54368 228 aa11□□□□□ -0.65
SSH1-203ENST00000546433 BCAR1P56945 870 aa11□□□□□ -0.65
SSH1-203ENST00000546433 STAT4Q14765 748 aa11□□□□□ -0.65
SSH1-203ENST00000546433 LARP7Q4G0J3 582 aaKnown RBP eCLIP11□□□□□ -0.65
SSH1-203ENST00000546433 RNF219Q5W0B1 726 aaPredicted RBP11□□□□□ -0.65
SSH1-203ENST00000546433 TADA2BQ86TJ2 420 aa11□□□□□ -0.65
SSH1-203ENST00000546433 METTL16Q86W50 562 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 SRBD1Q8N5C6 995 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 TRIM9Q9C026 710 aa11□□□□□ -0.65
SSH1-203ENST00000546433 CPVLQ9H3G5 476 aa11□□□□□ -0.65
SSH1-203ENST00000546433 MFSD1Q9H3U5 465 aa11□□□□□ -0.65
SSH1-203ENST00000546433 PPCSQ9HAB8 311 aa11□□□□□ -0.65
SSH1-203ENST00000546433 EHD2Q9NZN4 543 aa11□□□□□ -0.65
SSH1-203ENST00000546433 BFARQ9NZS9 450 aa11□□□□□ -0.65
SSH1-203ENST00000546433 WDR35Q9P2L0 1181 aa11□□□□□ -0.65
SSH1-203ENST00000546433 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
SSH1-203ENST00000546433 HEY1Q9Y5J3 304 aa11□□□□□ -0.65
SSH1-203ENST00000546433 ARHGDIAP52565 204 aa11□□□□□ -0.65
SSH1-203ENST00000546433 ERVK-9P63128 1117 aa11□□□□□ -0.65
SSH1-203ENST00000546433 ERVK-24P63145 666 aa11□□□□□ -0.65
SSH1-203ENST00000546433 MRPL46Q9H2W6 279 aaKnown RBP11□□□□□ -0.65
SSH1-203ENST00000546433 COL16A1Q07092 1604 aaPredicted RBP10.99□□□□□ -0.65
SSH1-203ENST00000546433 CFAP73A6NFT4 308 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms