RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ARHGEF35A5YM69 484 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 FCARP24071 287 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 TOB1P50616 345 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-221ENST00000546229 FOXK2Q01167 660 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
COPS7A-221ENST00000546229 ZNF174Q15697 407 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 AXDND1Q5T1B0 1012 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-221ENST00000546229 LIN9Q5TKA1 542 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 ATF7IP2Q5U623 682 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 SLC8B1Q6J4K2 584 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 FBXO18Q8NFZ0 1043 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 KIF2CQ99661 725 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 AVENQ9NQS1 362 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-221ENST00000546229 TNFSF13BQ9Y275 285 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 MTF2Q9Y483 593 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-221ENST00000546229 PHLPP2Q6ZVD8 1323 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 ARHGEF37A1IGU5 675 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 I3L4J1 428 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 OR1D2P34982 312 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 GRM5P41594 1212 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 BRCC3P46736 316 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 EFNA5P52803 228 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 ROR1Q01973 937 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 IL17AQ16552 155 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 PRSS36Q5K4E3 855 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 PDXDC1Q6P996 788 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 RTL10Q7L3V2 364 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 CEP57Q86XR8 500 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 C1orf210Q8IVY1 113 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 SUMF1Q8NBK3 374 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 NELL1Q92832 810 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 ACO2Q99798 780 aaKnown RBP13.82□□□□□ -0.2
COPS7A-221ENST00000546229 ADPGKQ9BRR6 497 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 MMTAG2Q9BU76 263 aaKnown RBP13.82□□□□□ -0.2
COPS7A-221ENST00000546229 SEMA4AQ9H3S1 761 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 KCNH3Q9ULD8 1083 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 SIT1Q9Y3P8 196 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 NCANO14594 1321 aa13.82□□□□□ -0.2
COPS7A-221ENST00000546229 SMIM28A0A1B0GU29 152 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 B3GAT3O94766 335 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 ABLIM3O94929 683 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
COPS7A-221ENST00000546229 NPTX2P47972 431 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 FZD5Q13467 585 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 TRIM29Q14134 588 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 MRPL58Q14197 206 aaKnown RBP13.81□□□□□ -0.2
COPS7A-221ENST00000546229 PPP2R5AQ15172 486 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 MLF2Q15773 248 aaPredicted RBP13.81□□□□□ -0.2
COPS7A-221ENST00000546229 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 MTSS1LQ765P7 747 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 ERMP1Q7Z2K6 904 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 CCDC83Q8IWF9 413 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 KIFAP3Q92845 792 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 UROC1Q96N76 676 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 KXD1Q9BQD3 176 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 LLPHQ9BRT6 129 aaKnown RBP13.81□□□□□ -0.2
COPS7A-221ENST00000546229 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 PLA2G2FQ9BZM2 168 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 CNTN3Q9P232 1028 aa13.81□□□□□ -0.2
COPS7A-221ENST00000546229 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
COPS7A-221ENST00000546229 KANSL1LA0AUZ9 987 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 XYLBO75191 536 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 KCNE1P15382 129 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 CEBPBP17676 345 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.2
COPS7A-221ENST00000546229 CCR2P41597 374 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 ID4P47928 161 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 PRKCQQ04759 706 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
COPS7A-221ENST00000546229 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
COPS7A-221ENST00000546229 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 ERMNQ8TAM6 284 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 ING5Q8WYH8 240 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 CLDN23Q96B33 292 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 RMDN1Q96DB5 314 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 C8orf76Q96K31 380 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 OSBPL6Q9BZF3 934 aa13.8□□□□□ -0.2
COPS7A-221ENST00000546229 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
COPS7A-221ENST00000546229 KIF26AQ9ULI4 1882 aaPredicted RBP13.8□□□□□ -0.2
COPS7A-221ENST00000546229 E9PMD0 336 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 MOSPD3O75425 235 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 ECI2O75521 394 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 SEC24AO95486 1093 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 VNN2O95498 520 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 RHOP08100 348 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 TDGF1P13385 188 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 LIG1P18858 919 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 TARSP26639 723 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms