RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 H7C0C1 242 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 ADRB2P07550 413 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 CAP2P40123 477 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 ATP5OP48047 213 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 RARRES1P49788 294 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 YARSP54577 528 aaKnown RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 EIF3BP55884 814 aaKnown RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 PSMC5P62195 406 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 PRKCEQ02156 737 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 PPP2R5CQ13362 524 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 AMHR2Q16671 573 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 NT5DC3Q86UY8 548 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 PIH1D1Q9NWS0 290 aaKnown RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 FBXO40Q9UH90 709 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 SLC12A6Q9UHW9 1150 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 PCDHA10Q9Y5I2 948 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 RASA4BC9J798 803 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 RASA4O43374 803 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 CRY2Q49AN0 593 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 COBLL1Q53SF7 1204 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 DNAJC24Q6P3W2 148 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 C1orf186Q6ZWK4 172 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 RFX6Q8HWS3 928 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 ZBED8Q8IZ13 594 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 ERP44Q9BS26 406 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 CHST7Q9NS84 486 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 AGO2Q9UKV8 859 aaKnown RBP10.42□□□□□ -0.74
TRAF1-203ENST00000546084 L3MBTL1Q9Y468 752 aa10.42□□□□□ -0.74
TRAF1-203ENST00000546084 SNED1Q8TER0 1413 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 ATP2A1O14983 1001 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 BANF1O75531 89 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 RASSF9O75901 435 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 KITP10721 976 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 ETS1P14921 441 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 HOXD13P35453 343 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 PEX19P40855 299 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 PLCB4Q15147 1175 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 WDR72Q3MJ13 1102 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 ZCWPW2Q504Y3 356 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MDH1BQ5I0G3 518 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 GJC2Q5T442 439 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 FAM149B1Q96BN6 582 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MCEEQ96PE7 176 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MIS12Q9H081 205 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 FEM1BQ9UK73 627 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 PITPNM2Q9BZ72 1349 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MYH14Q7Z406 1995 aaKnown RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 EDIL3O43854 480 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 SKAP2O75563 359 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MYCP01106 439 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MYBL1P10243 752 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 PLS3P13797 630 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 RAP1GAPP47736 663 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 GMPSP49915 693 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 ORC2Q13416 577 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 BYSLQ13895 437 aaKnown RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 TAOK1Q7L7X3 1001 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 FAM160B2Q86V87 743 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 ZNF354CQ86Y25 554 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 RHOT2Q8IXI1 618 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MICAL1Q8TDZ2 1067 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 ATP8B4Q8TF62 1192 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 FAM151AQ8WW52 585 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 KLHL29Q96CT2 875 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 NOD2Q9HC29 1040 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 SUCLA2Q9P2R7 463 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 GLI3P10071 1580 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 CCDC195A0A1B0GUA6 201 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 HLA-DRAP01903 254 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 CREB1P16220 341 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 RPL21P46778 160 aaKnown RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 GSCP56915 257 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 TNFAIP1Q13829 316 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 TMEM130Q8N3G9 435 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 SYTL5Q8TDW5 730 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 LRRC4CQ9HCJ2 640 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 MYOZ2Q9NPC6 264 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 HOMER3Q9NSC5 361 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 HERC5Q9UII4 1024 aaKnown RBP10.41□□□□□ -0.74
TRAF1-203ENST00000546084 COG5Q9UP83 839 aa10.41□□□□□ -0.74
TRAF1-203ENST00000546084 CYP11B1P15538 503 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 RCN2Q14257 317 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 OR6B2Q6IFH4 312 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 SEMA4DQ92854 862 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 CFAP36Q96G28 342 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 ATXN7L3BQ96GX2 97 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 HEXIM2Q96MH2 286 aaKnown RBP10.4□□□□□ -0.74
TRAF1-203ENST00000546084 JPH1Q9HDC5 661 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-203ENST00000546084 TUFT1Q9NNX1 390 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 TMX2Q9Y320 296 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 TIAM2Q8IVF5 1701 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 A0A0G2JND7 137 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 STAM2O75886 525 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 VCAM1P19320 739 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 ECHS1P30084 290 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 CCND2P30279 289 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 HOXA10P31260 410 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms