RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 ZFP1Q6P2D0 407 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 DNAJC24Q6P3W2 148 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 C10orf107Q8IVU9 208 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 C17orf80Q9BSJ5 609 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 IKBKBO14920 756 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TIMM44O43615 452 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 RAD23AP54725 363 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 KCNT1Q5JUK3 1230 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 GALNT17Q6IS24 598 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 SETD9Q8NE22 299 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ITGA3P26006 1051 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ABRQ12979 859 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TIGD7Q6NT04 549 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PRMT1Q99873 361 aaKnown RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ZNF304Q9HCX3 659 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TMCO1Q9UM00 188 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ABCG2Q9UNQ0 655 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 WDR37Q9Y2I8 494 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ULK1O75385 1050 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 BRAFP15056 766 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 COPAP53621 1224 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ITIH4Q14624 930 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ZFP69Q49AA0 526 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 CYP4Z1Q86W10 505 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ARMT1Q9H993 441 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 LRWD1Q9UFC0 647 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 SPEF1Q9Y4P9 236 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 KRT36O76013 467 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 AGTP01019 485 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 RGS6P49758 472 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 RPS6P62753 249 aaKnown RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 LRRC74AQ0VAA2 488 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 C12orf66Q96MD2 445 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PLIN2Q99541 437 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 GINM1Q9NU53 330 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 DDX56Q9NY93 547 aaKnown RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TRMT112Q9UI30 125 aaKnown RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TPRKBQ9Y3C4 175 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 SLC16A1P53985 500 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PNPT1Q8TCS8 783 aaKnown RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 LENG1Q96BZ8 264 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TCEANC2Q96MN5 208 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 VPS35Q96QK1 796 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 BDH2Q9BUT1 245 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PTPN6P29350 595 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 MTFR1Q15390 333 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TTC23Q5W5X9 447 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 AMER2Q8N7J2 671 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 DHTKD1Q96HY7 919 aaPredicted RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PPP1R36Q96LQ0 422 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 SAYSD1Q9NPB0 183 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TMEM63CQ9P1W3 806 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ZMYND10O75800 440 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 CYP7A1P22680 504 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 MAPK1P28482 360 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 RHAGQ02094 409 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 NSUN2Q08J23 767 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 STAT4Q14765 748 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 REXO1Q8N1G1 1221 aaKnown RBP9.47□□□□□ -0.89
SCN8A-203ENST00000545061 BBS1Q8NFJ9 593 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 CALN1Q9BXU9 219 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 HSMCR30P0CW71 290 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 ARMC6Q6NXE6 501 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 TRPV3Q8NET8 790 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
SCN8A-203ENST00000545061 PRPF4O43172 522 aaKnown RBP eCLIP9.46□□□□□ -0.89
SCN8A-203ENST00000545061 RAPGEF3O95398 923 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.89
SCN8A-203ENST00000545061 NAA35Q5VZE5 725 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 IFNEQ86WN2 208 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 HES6Q96HZ4 224 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 NLRP3Q96P20 1036 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 VPS54Q9P1Q0 977 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 EIF4E1BA6NMX2 242 aaKnown RBP9.46□□□□□ -0.89
SCN8A-203ENST00000545061 COBLO75128 1261 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 KHDRBS3O75525 346 aaKnown RBP9.46□□□□□ -0.89
SCN8A-203ENST00000545061 RAB15P59190 212 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 BTKQ06187 659 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 MYD88Q99836 296 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 STK33Q9BYT3 514 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 PANK4Q9NVE7 773 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 TRPM5Q9NZQ8 1165 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 SLC25A13Q9UJS0 675 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.89
SCN8A-203ENST00000545061 CCT8L1PA6NM43 557 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 PPP1R37O75864 691 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 MDH1P40925 334 aaKnown RBP9.46□□□□□ -0.89
SCN8A-203ENST00000545061 FNTAP49354 379 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 KCNQ4P56696 695 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 ZNF846Q147U1 533 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 TOM1L2Q6ZVM7 507 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 NMRK1Q9NWW6 199 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 hCG_1642624A0A1W2PR95 340 aa9.46□□□□□ -0.89
SCN8A-203ENST00000545061 MAGEB16A2A368 324 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms