RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 GLG1Q92896 1179 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 CYFIP2Q96F07 1278 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 PLEKHA4Q9H4M7 779 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 TMEM134Q9H6X4 195 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 NOVA2Q9UNW9 492 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 E7EVH7 732 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 SUPT20HL2P0C7V6 817 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 PTPRAP18433 802 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 MAPK4P31152 587 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 RPL21P46778 160 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 LIG4P49917 911 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 ACTR2P61160 394 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 MAGOHP61326 146 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 SUPT20HL1Q3ZLR7 823 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 LIN9Q5TKA1 542 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 SNRNP48Q6IEG0 339 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 CHST13Q8NET6 341 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 BSNDQ8WZ55 320 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 SAAL1Q96ER3 474 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 NIFKQ9BYG3 293 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 PORCNQ9H237 461 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 DHX33Q9H6R0 707 aaKnown RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
PAAF1-215ENST00000544909 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
PAAF1-215ENST00000544909 BRCA1P38398 1863 aaKnown RBP13.31□□□□□ -0.28
PAAF1-215ENST00000544909 ADGRA3Q8IWK6 1321 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 GOLGA8IPA6NC78 632 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 GOLGA8JA6NMD2 632 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 THAP12O43422 761 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
PAAF1-215ENST00000544909 MARCKSL1P49006 195 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 LMNB2Q03252 620 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 PTK6Q13882 451 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 SGO2Q562F6 1265 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
PAAF1-215ENST00000544909 TTC27Q6P3X3 843 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 MON1BQ7L1V2 547 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
PAAF1-215ENST00000544909 TATDN2Q93075 761 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 ZBTB9Q96C00 473 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 CEP89Q96ST8 783 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 ANAPC7Q9UJX3 599 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 SNX24Q9Y343 169 aa13.31□□□□□ -0.28
PAAF1-215ENST00000544909 IGKV6D-21A0A0A0MT36 114 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-215ENST00000544909 RIPK2O43353 540 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 RGS20O76081 388 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 PROSCO94903 275 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
PAAF1-215ENST00000544909 RARAP10276 462 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 CETN2P41208 172 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 EMC2Q15006 297 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 GKAP1Q5VSY0 366 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-215ENST00000544909 ZPBP2Q6X784 338 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 CCDC60Q8IWA6 550 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-215ENST00000544909 KATNAL2Q8IYT4 538 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 ZSWIM2Q8NEG5 633 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 OR2W6PQ8NHA6 318 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 BICD1Q96G01 975 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 FAXDC2Q96IV6 333 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 SERPINB12Q96P63 405 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 POLR3FQ9H1D9 316 aaPredicted RBP13.3□□□□□ -0.28
PAAF1-215ENST00000544909 FBXO40Q9UH90 709 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 KIAA1217Q5T5P2 1943 aa13.3□□□□□ -0.28
PAAF1-215ENST00000544909 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 POLGP54098 1239 aaPredicted RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SURF1Q15526 300 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 STXBP2Q15833 593 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SH3D19Q5HYK7 790 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 LRRC38Q5VT99 294 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SWSAP1Q6NVH7 229 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 DRICH1Q6PGQ1 229 aaPredicted RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 RHBDF2Q6PJF5 856 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 CATSPERGQ6ZRH7 1159 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SUGP1Q8IWZ8 645 aaKnown RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 RHOT1Q8IXI2 618 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 CCDC89Q8N998 374 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SLC7A3Q8WY07 619 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SNF8Q96H20 258 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 XPO6Q96QU8 1125 aaKnown RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 CGRRF1Q99675 332 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 TRIM31Q9BZY9 425 aa13.29□□□□□ -0.28
PAAF1-215ENST00000544909 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 AGO2Q9UKV8 859 aaKnown RBP13.29□□□□□ -0.28
PAAF1-215ENST00000544909 ZNFX1Q9P2E3 1918 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms