RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 SNTG2Q9NY99 539 aa14.2□□□□□ -0.14
USP28-212ENST00000544750 SPAG17Q6Q759 2223 aa14.2□□□□□ -0.14
USP28-212ENST00000544750 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
USP28-212ENST00000544750 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 NRG2O14511 850 aaPredicted RBP14.19□□□□□ -0.14
USP28-212ENST00000544750 CPLX1O14810 134 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 RECQL4O94761 1208 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 TANGO2Q6ICL3 276 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 PIK3AP1Q6ZUJ8 805 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 DNASE1L2Q92874 299 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 ELSPBP1Q96BH3 223 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 MCRS1Q96EZ8 462 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 NAP1L4Q99733 375 aaKnown RBP14.19□□□□□ -0.14
USP28-212ENST00000544750 POLR3FQ9H1D9 316 aaPredicted RBP14.19□□□□□ -0.14
USP28-212ENST00000544750 CHRDQ9H2X0 955 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 PDZD7Q9H5P4 517 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 GJB4Q9NTQ9 266 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 PRMT7Q9NVM4 692 aaPredicted RBP14.19□□□□□ -0.14
USP28-212ENST00000544750 USP18Q9UMW8 372 aa14.19□□□□□ -0.14
USP28-212ENST00000544750 MRPS23Q9Y3D9 190 aaKnown RBP14.19□□□□□ -0.14
USP28-212ENST00000544750 ARHGEF37A1IGU5 675 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
USP28-212ENST00000544750 EDN1P05305 212 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 RHOP08100 348 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 CEBPBP17676 345 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 RBM25P49756 843 aaKnown RBP14.18□□□□□ -0.14
USP28-212ENST00000544750 PRSS36Q5K4E3 855 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 DDX27Q96GQ7 796 aaKnown RBP14.18□□□□□ -0.14
USP28-212ENST00000544750 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
USP28-212ENST00000544750 GPRC5CQ9NQ84 441 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 MRPS17Q9Y2R5 130 aaKnown RBP14.18□□□□□ -0.14
USP28-212ENST00000544750 BACE2Q9Y5Z0 518 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 CDY1Q9Y6F8 540 aa14.18□□□□□ -0.14
USP28-212ENST00000544750 A0A087WWV3 80 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 SLC30A4O14863 429 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 N4BP3O15049 544 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
USP28-212ENST00000544750 XRCC6P12956 609 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP28-212ENST00000544750 PIGOQ8TEQ8 1089 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 TNFRSF25Q93038 417 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 PPP1R10Q96QC0 940 aaKnown RBP14.17□□□□□ -0.14
USP28-212ENST00000544750 CCDC113Q9H0I3 377 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 GMEB2Q9UKD1 530 aa14.17□□□□□ -0.14
USP28-212ENST00000544750 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.17□□□□□ -0.14
USP28-212ENST00000544750 STK36Q9NRP7 1315 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 KIF26AQ9ULI4 1882 aaPredicted RBP14.16□□□□□ -0.14
USP28-212ENST00000544750 LRRIQ4A6NIV6 560 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 MARCH6O60337 910 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 USO1O60763 962 aaKnown RBP14.16□□□□□ -0.14
USP28-212ENST00000544750 LRP3O75074 770 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 ABLIM3O94929 683 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 PTPN2P17706 415 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 TKTP29401 623 aaKnown RBP14.16□□□□□ -0.14
USP28-212ENST00000544750 NRLP54845 237 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 SPEM2Q0P670 501 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 SCRN1Q12765 414 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 STK3Q13188 491 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 EEF1DP3Q658K8 133 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 LAIR1Q6GTX8 287 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 CPLX2Q6PUV4 134 aaKnown RBP14.16□□□□□ -0.14
USP28-212ENST00000544750 MAP4K3Q8IVH8 894 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 NOSTRINQ8IVI9 506 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 CELF5Q8N6W0 485 aaKnown RBP14.16□□□□□ -0.14
USP28-212ENST00000544750 C3orf58Q8NDZ4 430 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 NETO1Q8TDF5 533 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 BSNDQ8WZ55 320 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 TCEAL4Q96EI5 215 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 IER2Q9BTL4 223 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 TRPV5Q9NQA5 729 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 PCDHA12Q9UN75 941 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 USP20Q9Y2K6 914 aa14.16□□□□□ -0.14
USP28-212ENST00000544750 SDK1Q7Z5N4 2213 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 EML5Q05BV3 1969 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
USP28-212ENST00000544750 WDR27A2RRH5 827 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 ACKR2O00590 384 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 MAN2B1O00754 1011 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 WNT7AO00755 349 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 MICAL2O94851 1124 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 SPATA31C1P0DKV0 1188 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 CCR2P41597 374 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 CLCNKBP51801 687 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 ROR1Q01973 937 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 NR5A1Q13285 461 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 GAS6Q14393 721 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 GRM2Q14416 872 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 UPP1Q16831 310 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 ST3GAL2Q16842 350 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 FAM78AQ5JUQ0 283 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 SLC8B1Q6J4K2 584 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 ANKS3Q6ZW76 656 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 ZNF461Q8TAF7 563 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 ASB16Q96NS5 453 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 TM6SF1Q9BZW5 370 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 TTC12Q9H892 705 aaPredicted RBP14.15□□□□□ -0.14
USP28-212ENST00000544750 ZNF334Q9HCZ1 680 aaPredicted RBP14.15□□□□□ -0.14
USP28-212ENST00000544750 NDRG2Q9UN36 371 aaKnown RBP14.15□□□□□ -0.14
USP28-212ENST00000544750 CYP46A1Q9Y6A2 500 aa14.15□□□□□ -0.14
USP28-212ENST00000544750 DTNBO60941 627 aa14.14□□□□□ -0.15
USP28-212ENST00000544750 MOSPD3O75425 235 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms