RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ECM1Q16610 540 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 PARM1Q6UWI2 310 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 DTHD1Q6ZMT9 781 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 ZBTB44Q8NCP5 570 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 BSNDQ8WZ55 320 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 HERC2P3Q9BVR0 1158 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 EPC1Q9H2F5 836 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 PARD6AQ9NPB6 346 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.85■□□□□ 0.45
DDX55-212ENST00000544738 GMEB2Q9UKD1 530 aa17.85■□□□□ 0.45
DDX55-212ENST00000544738 DOCK8Q8NF50 2099 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 H3BQV1 296 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 KCNA4P22459 653 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 MLF2Q15773 248 aaPredicted RBP17.84■□□□□ 0.45
DDX55-212ENST00000544738 GSTCDQ8NEC7 633 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 FGF14Q92915 247 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 PRKD2Q9BZL6 878 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 CCDC113Q9H0I3 377 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 MARCH5Q9NX47 278 aa17.84■□□□□ 0.45
DDX55-212ENST00000544738 TBC1D4O60343 1298 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 EFEMP2O95967 443 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 FSHRP23945 695 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 GJB2P29033 226 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 GLUD2P49448 558 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 PRKCQQ04759 706 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 SPEM2Q0P670 501 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 LPAL2Q16609 132 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 APBB1IPQ7Z5R6 666 aaPredicted RBP17.83■□□□□ 0.44
DDX55-212ENST00000544738 GLYCTKQ8IVS8 523 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 GPR65Q8IYL9 337 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 RNF168Q8IYW5 571 aaPredicted RBP17.83■□□□□ 0.44
DDX55-212ENST00000544738 KCTD17Q8N5Z5 321 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 PLEKHA4Q9H4M7 779 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 PDZD7Q9H5P4 517 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 KLK14Q9P0G3 267 aa17.83■□□□□ 0.44
DDX55-212ENST00000544738 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.83■□□□□ 0.44
DDX55-212ENST00000544738 PHLPP2Q6ZVD8 1323 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 K7ERI5 159 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 LILRB5O75023 590 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 LIG1P18858 919 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 TUSC3Q13454 348 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 ZBTB41Q5SVQ8 909 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 HDAC7Q8WUI4 952 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 DDX23Q9BUQ8 820 aaKnown RBP17.82■□□□□ 0.44
DDX55-212ENST00000544738 RXFP1Q9HBX9 757 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 ADAM28Q9UKQ2 775 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
DDX55-212ENST00000544738 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
DDX55-212ENST00000544738 TDRD15B5MCY1 1934 aaKnown RBP17.82■□□□□ 0.44
DDX55-212ENST00000544738 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.81■□□□□ 0.44
DDX55-212ENST00000544738 TTLL13PA6NNM8 815 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 E9PMD0 336 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 TGM5O43548 720 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 C1RP00736 705 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 THP07101 528 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 ATP2C1P98194 919 aaPredicted RBP17.81■□□□□ 0.44
DDX55-212ENST00000544738 DSG1Q02413 1049 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 COL9A2Q14055 689 aaPredicted RBP17.81■□□□□ 0.44
DDX55-212ENST00000544738 USP41Q3LFD5 358 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 DCAF4L1Q3SXM0 396 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 ARL6IP4Q66PJ3 421 aaKnown RBP17.81■□□□□ 0.44
DDX55-212ENST00000544738 GRASPQ7Z6J2 395 aaPredicted RBP17.81■□□□□ 0.44
DDX55-212ENST00000544738 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 DRC1Q96MC2 740 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 TIPINQ9BVW5 301 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 LTB4R2Q9NPC1 389 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDX55-212ENST00000544738 CHST7Q9NS84 486 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 ZDHHC7Q9NXF8 308 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 KCNG1Q9UIX4 513 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 RAB23Q9ULC3 237 aa17.81■□□□□ 0.44
DDX55-212ENST00000544738 ZFP37Q9Y6Q3 630 aaPredicted RBP17.81■□□□□ 0.44
DDX55-212ENST00000544738 PP2D1A8MPX8 630 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 TADA2AO75478 443 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 CD2BP2O95400 341 aaKnown RBP17.8■□□□□ 0.44
DDX55-212ENST00000544738 CDC25AP30304 524 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 MAGEA9P43362 315 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 NTHL1P78549 312 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 CREMQ03060 361 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 IL17AQ16552 155 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 FUT10Q6P4F1 479 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 C17orf75Q9HAS0 396 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 POLD4Q9HCU8 107 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 SNTG2Q9NY99 539 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 CDH7Q9ULB5 785 aa17.8■□□□□ 0.44
DDX55-212ENST00000544738 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
DDX55-212ENST00000544738 CNOT1A5YKK6 2376 aaKnown RBP17.8■□□□□ 0.44
DDX55-212ENST00000544738 SF3B1O75533 1304 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■■■■ 88.4
DDX55-212ENST00000544738 CCDC169A6NNP5 214 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 SLC30A4O14863 429 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 NCAM2O15394 837 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 RECQL4O94761 1208 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 NPTX2P47972 431 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 PEX3P56589 373 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 DMP1Q13316 513 aaPredicted RBP17.79■□□□□ 0.44
DDX55-212ENST00000544738 HSP90AA2PQ14568 343 aaPredicted RBP17.79■□□□□ 0.44
DDX55-212ENST00000544738 ATF7IP2Q5U623 682 aa17.79■□□□□ 0.44
DDX55-212ENST00000544738 LARP1BQ659C4 914 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms