RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 AP5M1Q9H0R1 490 aa13.72□□□□□ -0.21
PAAF1-214ENST00000544552 CDT1Q9H211 546 aa13.72□□□□□ -0.21
PAAF1-214ENST00000544552 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
PAAF1-214ENST00000544552 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
PAAF1-214ENST00000544552 HYOU1Q9Y4L1 999 aa13.72□□□□□ -0.21
PAAF1-214ENST00000544552 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
PAAF1-214ENST00000544552 NCANO14594 1321 aa13.71□□□□□ -0.21
PAAF1-214ENST00000544552 SMIM35A0A1B0GVV1 85 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 VTNP04004 478 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 CLTAP09496 248 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 SMIM10L2AP0DMW4 78 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 SMIM10L2BP0DMW5 78 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 HARSP12081 509 aaKnown RBP13.71□□□□□ -0.22
PAAF1-214ENST00000544552 CHRNB2P17787 502 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 USP8P40818 1118 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 HADHBP55084 474 aaKnown RBP13.71□□□□□ -0.22
PAAF1-214ENST00000544552 FCGRTP55899 365 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 ADAM17P78536 824 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 CDR2Q01850 454 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 ITIH3Q06033 890 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 NCOA4Q13772 614 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 SEZ6Q53EL9 994 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 MEI1Q5TIA1 1274 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 EEF1DP3Q658K8 133 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.22
PAAF1-214ENST00000544552 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 SLFN11Q7Z7L1 901 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 NOP9Q86U38 636 aaKnown RBP13.71□□□□□ -0.22
PAAF1-214ENST00000544552 ZNF677Q86XU0 584 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.22
PAAF1-214ENST00000544552 RFFLQ8WZ73 363 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 SETD4Q9NVD3 440 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 WBP1LQ9NX94 342 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 RNF14Q9UBS8 474 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.22
PAAF1-214ENST00000544552 A0A1B0GUA9 196 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 GPR25O00155 361 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 KPNA6O60684 536 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 PHACTR2O75167 634 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 RTN2O75298 545 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 ASS1P00966 412 aaKnown RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 KCNA4P22459 653 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 CTGFP29279 349 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 PDE6CP51160 858 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 CUL2Q13617 745 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 MFSD10Q14728 455 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 TMEM132AQ24JP5 1023 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 SGSM1Q2NKQ1 1148 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 ZNF572Q7Z3I7 529 aaPredicted RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 SLC47A2Q86VL8 602 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 THNSL1Q8IYQ7 743 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 LRRC57Q8N9N7 239 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 TPCN2Q8NHX9 752 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 SLC20A1Q8WUM9 679 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 NLRP7Q8WX94 980 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 CTNNBL1Q8WYA6 563 aaPredicted RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 DDX1Q92499 740 aaKnown RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 FAXDC2Q96IV6 333 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 ZNF668Q96K58 619 aaPredicted RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 OSBPL9Q96SU4 736 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 ADAMTS10Q9H324 1103 aa13.7□□□□□ -0.22
PAAF1-214ENST00000544552 RPF1Q9H9Y2 349 aaKnown RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
PAAF1-214ENST00000544552 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 DUSP11O75319 330 aaKnown RBP13.69□□□□□ -0.22
PAAF1-214ENST00000544552 AKR1A1P14550 325 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-214ENST00000544552 ACO1P21399 889 aaKnown RBP13.69□□□□□ -0.22
PAAF1-214ENST00000544552 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
PAAF1-214ENST00000544552 PSEN2P49810 448 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
PAAF1-214ENST00000544552 FMO1Q01740 532 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 SP3Q02447 781 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 CREG2Q8IUH2 290 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 RHOT2Q8IXI1 618 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 SYCE1Q8N0S2 351 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 ASB7Q9H672 318 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 APOBEC3GQ9HC16 384 aaKnown RBP13.69□□□□□ -0.22
PAAF1-214ENST00000544552 MGAMO43451 1857 aa13.69□□□□□ -0.22
PAAF1-214ENST00000544552 CES2O00748 559 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 TSPAN1O60635 241 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 GPR32O75388 356 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-214ENST00000544552 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-214ENST00000544552 TUBBP07437 444 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 H2AFXP16104 143 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-214ENST00000544552 NKX3-2P78367 333 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 LACTBP83111 547 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-214ENST00000544552 RBM10P98175 930 aaKnown RBP13.68□□□□□ -0.22
PAAF1-214ENST00000544552 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 SLC35G2Q8TBE7 412 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 TAF4BQ92750 862 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 PCDHB18PQ96TA0 734 aa13.68□□□□□ -0.22
PAAF1-214ENST00000544552 GCOM2Q9BZD3 368 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms