RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 UTRNP46939 3433 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 K7ERI5 159 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 MYO1CO00159 1063 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 ERLIN2O94905 339 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 VNN1O95497 513 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 PIK3CAP42336 1068 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 CCT5P48643 541 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 ALDH5A1P51649 535 aaPredicted RBP19.29■□□□□ 0.68
VIM-209ENST00000544301 SIX1Q15475 284 aaPredicted RBP19.29■□□□□ 0.68
VIM-209ENST00000544301 TREML2Q5T2D2 321 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 CCDC137Q6PK04 289 aaKnown RBP19.29■□□□□ 0.68
VIM-209ENST00000544301 ZNF677Q86XU0 584 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 MCOLN2Q8IZK6 566 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 SLC7A3Q8WY07 619 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 GRHL1Q9NZI5 618 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 MTUS1Q9ULD2 1270 aa19.29■□□□□ 0.68
VIM-209ENST00000544301 PODXLO00592 558 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 RARAP10276 462 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 PLTPP55058 493 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 SLFN12LQ6IEE8 588 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 SPOPLQ6IQ16 392 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 LBX2Q6XYB7 198 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 TARS2Q9BW92 718 aaKnown RBP19.28■□□□□ 0.68
VIM-209ENST00000544301 AVENQ9NQS1 362 aaPredicted RBP19.28■□□□□ 0.68
VIM-209ENST00000544301 RBAKQ9NYW8 714 aaPredicted RBP19.28■□□□□ 0.68
VIM-209ENST00000544301 ANAPC7Q9UJX3 599 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 SNCAIPQ9Y6H5 919 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 SIP14410 1827 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 GSTTP1A0A1W2PQM5 241 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 ZEB2O60315 1214 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 ACO1P21399 889 aaKnown RBP19.28■□□□□ 0.68
VIM-209ENST00000544301 UBA1P22314 1058 aaKnown RBP19.28■□□□□ 0.68
VIM-209ENST00000544301 MAPK4P31152 587 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 LSP1P33241 339 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 COILP38432 576 aaPredicted RBP19.28■□□□□ 0.68
VIM-209ENST00000544301 BPIFB4P59827 614 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 ZBTB41Q5SVQ8 909 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 AGBL2Q5U5Z8 902 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 FBXO25Q8TCJ0 367 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 CPA5Q8WXQ8 436 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 PCYT2Q99447 389 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 BTBD7Q9P203 1132 aa19.28■□□□□ 0.68
VIM-209ENST00000544301 MROH7Q68CQ1 1323 aa19.27■□□□□ 0.68
VIM-209ENST00000544301 EDN1P05305 212 aa19.27■□□□□ 0.68
VIM-209ENST00000544301 HPDP32754 393 aaPredicted RBP19.27■□□□□ 0.68
VIM-209ENST00000544301 MDH1P40925 334 aaKnown RBP19.27■□□□□ 0.68
VIM-209ENST00000544301 RPL21P46778 160 aaKnown RBP19.27■□□□□ 0.68
VIM-209ENST00000544301 VGLL4Q14135 290 aa19.27■□□□□ 0.68
VIM-209ENST00000544301 MSTO1Q9BUK6 570 aa19.27■□□□□ 0.68
VIM-209ENST00000544301 FBXO40Q9UH90 709 aa19.27■□□□□ 0.68
VIM-209ENST00000544301 A0A0B4J269 797 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 LDHAP00338 332 aaKnown RBP19.27■□□□□ 0.67
VIM-209ENST00000544301 RFC5P40937 340 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 TARBP2Q15633 366 aaKnown RBP19.27■□□□□ 0.67
VIM-209ENST00000544301 ARFGAP2Q8N6H7 521 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 RUNDC3BQ96NL0 473 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 TRIM7Q9C029 511 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 EPB41L4BQ9H329 900 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 APOBEC3GQ9HC16 384 aaKnown RBP19.27■□□□□ 0.67
VIM-209ENST00000544301 BCCIPQ9P287 314 aaKnown RBP eCLIP19.27■□□□□ 0.67
VIM-209ENST00000544301 ANKFY1Q9P2R3 1169 aa19.27■□□□□ 0.67
VIM-209ENST00000544301 FARP2O94887 1054 aaPredicted RBP19.26■□□□□ 0.67
VIM-209ENST00000544301 CYP1A1P04798 512 aaPredicted RBP19.26■□□□□ 0.67
VIM-209ENST00000544301 MYBL1P10243 752 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 RRM1P23921 792 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 GBP1P32455 592 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 CUL2Q13617 745 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 RIOX2Q8IUF8 465 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 C12orf50Q8NA57 414 aaPredicted RBP19.26■□□□□ 0.67
VIM-209ENST00000544301 TRIM11Q96F44 468 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 LRRC4CQ9HCJ2 640 aa19.26■□□□□ 0.67
VIM-209ENST00000544301 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 SOWAHBA6NEL2 793 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CLDN3O15551 220 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 EDNRBP24530 442 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 FNTAP49354 379 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 PMS2P54278 862 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 EIF3BP55884 814 aaKnown RBP19.25■□□□□ 0.67
VIM-209ENST00000544301 CENPCQ03188 943 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 KRT71Q3SY84 523 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CCDC105Q8IYK2 499 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CYFIP2Q96F07 1278 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CGRRF1Q99675 332 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 SGIP1Q9BQI5 828 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 EPN3Q9H201 632 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 TMEM134Q9H6X4 195 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 NRBP2Q9NSY0 501 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CNTNAP2Q9UHC6 1331 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 EBAG9O00559 213 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 FSCN2O14926 492 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 TRIM66O15016 1216 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 NSFP46459 744 aaKnown RBP19.25■□□□□ 0.67
VIM-209ENST00000544301 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
VIM-209ENST00000544301 IFFO1Q0D2I5 559 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CAPSQ13938 189 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 PTGISQ16647 500 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 MON1BQ7L1V2 547 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 PHLDB2Q86SQ0 1253 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 GPC2Q8N158 579 aa19.25■□□□□ 0.67
VIM-209ENST00000544301 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms