RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 OR1G1P47890 313 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 AGMOQ6ZNB7 445 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 NLRP10Q86W26 655 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 CNBD1Q8NA66 436 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 ST13P5Q8NFI4 369 aaPredicted RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 UCMAQ8WVF2 138 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 DPF3Q92784 378 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 TNIP3Q96KP6 325 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 VPS35Q96QK1 796 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 PACSIN1Q9BY11 444 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 FRMD8Q9BZ67 464 aaPredicted RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 LGR6Q9HBX8 967 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 CLEC4AQ9UMR7 237 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 TRIM33Q9UPN9 1127 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 GPSM3Q9Y4H4 160 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 SRCAPQ6ZRS2 3230 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 MAPK13O15264 365 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 FSBPO95073 299 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 APBB3O95704 486 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 KRT16P08779 473 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 FOXK1P85037 733 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 IFFO1Q0D2I5 559 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 ANKRD20A4Q4UJ75 823 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 PABPC1LQ4VXU2 614 aaKnown RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 ANKRD20A1Q5TYW2 823 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 CEP97Q8IW35 865 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 UNC45BQ8IWX7 931 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 PIK3C3Q8NEB9 887 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 NSUN6Q8TEA1 469 aaKnown RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 CGREF1Q99674 301 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 SCAND2PQ9GZW5 306 aaPredicted RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 LSG1Q9H089 658 aaKnown RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 LIN28AQ9H9Z2 209 aaKnown RBP9.41□□□□□ -0.9
VPS13D-212ENST00000543766 NOD2Q9HC29 1040 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 STON1Q9Y6Q2 735 aa9.41□□□□□ -0.9
VPS13D-212ENST00000543766 RGPD1P0DJD0 1748 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 NUDT19A8MXV4 375 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 E7ENQ6 273 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 GREM1O60565 184 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 HPGDP15428 266 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 HDGFP51858 240 aaKnown RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 GNGT1P63211 74 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 ARHGAP44Q17R89 818 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 NXPE3Q969Y0 559 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 SERINC2Q96SA4 455 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 METP08581 1390 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 SYF2O95926 243 aaKnown RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 HMOX1P09601 288 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 SFPQP23246 707 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 PON1P27169 355 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 VCPP55072 806 aaKnown RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 LIPEQ05469 1076 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 TLR1Q15399 786 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 KLHL38Q2WGJ6 581 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 LRRC8BQ6P9F7 803 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 ENAHQ8N8S7 591 aaPredicted RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 ARL5BQ96KC2 179 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 GAL3ST1Q99999 423 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 ZFYVE28Q9HCC9 887 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 THAP1Q9NVV9 213 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 CTNNAL1Q9UBT7 734 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 DMTF1Q9Y222 760 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 STK38LQ9Y2H1 464 aa9.4□□□□□ -0.9
VPS13D-212ENST00000543766 FAM32AQ9Y421 112 aaKnown RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 COL16A1Q07092 1604 aaPredicted RBP9.4□□□□□ -0.9
VPS13D-212ENST00000543766 A0A0G2JPF8 293 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 NUTM2FA1L443 756 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 HNRNPCL3B7ZW38 293 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 HNRNPCL4P0DMR1 293 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 PTPN9P43378 593 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 ARHGDIAP52565 204 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 GUCY2DQ02846 1103 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 NCAPHQ15003 741 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 C4orf22Q6V702 233 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 CYP4X1Q8N118 509 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 SLC9A6Q92581 669 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 HEPHQ9BQS7 1158 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 CDK19Q9BWU1 502 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 SH2D4AQ9H788 454 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 FANCEQ9HB96 536 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 GIMAP4Q9NUV9 329 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.91
VPS13D-212ENST00000543766 BTBD7Q9P203 1132 aa9.4□□□□□ -0.91
VPS13D-212ENST00000543766 MAP2P11137 1827 aaKnown RBP9.4□□□□□ -0.91
VPS13D-212ENST00000543766 NEDD4P46934 1319 aa9.39□□□□□ -0.91
VPS13D-212ENST00000543766 HTR2BP41595 481 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms