RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 KRT37O76014 449 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 NUMBP49757 651 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 RGS9BPQ6ZS82 235 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 CEP70Q8NHQ1 597 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 SLC26A7Q8TE54 656 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 MORC4Q8TE76 937 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 TLK1Q9UKI8 766 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 NID2Q14112 1375 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM187AA6NFU0 413 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 AKAP3O75969 853 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 CNGA1P29973 690 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 HSPA9P38646 679 aaKnown RBP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 IL31Q6EBC2 164 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 PURBQ96QR8 312 aaKnown RBP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 DUSP9Q99956 384 aaKnown RBP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 TLR10Q9BXR5 811 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 HSD3B7Q9H2F3 369 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 RNF146Q9NTX7 359 aa13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 RBAKQ9NYW8 714 aaPredicted RBP13.71□□□□□ -0.22
TUBGCP2-210ENST00000543663 LOC100653049A0A140TA62 436 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 DCTN3O75935 186 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 KRT34O76011 436 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 IL1R1P14778 569 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ARL4AP40617 200 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 NFX1Q12986 1120 aaKnown RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 TBX2Q13207 712 aaPredicted RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SLC35G1Q2M3R5 365 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 MIS18BP1Q6P0N0 1132 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SNF8Q96H20 258 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 AGAP3Q96P47 875 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ISCUQ9H1K1 167 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 USP15Q9Y4E8 981 aaPredicted RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 IQANK1A0A1B0GTG1 560 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 TTC36A6NLP5 189 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 LPXNO60711 386 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ENO1P06733 434 aaKnown RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 PSAPP07602 524 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 APRTP07741 180 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ELF1P32519 619 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 TRADDQ15628 312 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 NPY5RQ15761 445 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ZNF699Q32M78 642 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 DCAF4Q8WV16 495 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 BCAS3Q9H6U6 928 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 KCNG1Q9UIX4 513 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 ITGA8P53708 1063 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 CDH6P55285 790 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 SOX10P56693 466 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 TMED1Q13445 227 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 KCTD2Q14681 263 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 COG2Q14746 738 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAXCQ5TGI0 409 aa13.7□□□□□ -0.22
TUBGCP2-210ENST00000543663 CREB3O43889 395 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 KRT10P13645 584 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 PON1P27169 355 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 RGS7P49802 495 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 ART3Q13508 389 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 TSTA3Q13630 321 aaPredicted RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 DALRD3Q5D0E6 543 aaKnown RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 FAM102AQ5T9C2 384 aaPredicted RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 HHIPL2Q6UWX4 724 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 AFAP1L2Q8N4X5 818 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 NSMCE1Q8WV22 266 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 ACP6Q9NPH0 428 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 UBE4BO95155 1302 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 WEE2P0C1S8 567 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 ARP10275 920 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 ALDH18A1P54886 795 aaKnown RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 ORC1Q13415 861 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 DCAF15Q66K64 600 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 CYB5D1Q6P9G0 228 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 SKA2Q8WVK7 121 aaPredicted RBP13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 WNT8AQ9H1J5 351 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 AS3MTQ9HBK9 375 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
TUBGCP2-210ENST00000543663 CHMP2BQ9UQN3 213 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms