RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 ADGRA3Q8IWK6 1321 aa13.78□□□□□ -0.2
DDX11-223ENST00000542838 CALCAP01258 141 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 P4HBP07237 508 aaKnown RBP13.77□□□□□ -0.2
DDX11-223ENST00000542838 GTF2BQ00403 316 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 MTFR1Q15390 333 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 CLEC16AQ2KHT3 1053 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 PPP1R21Q6ZMI0 780 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 FAM47EQ6ZV65 393 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 TRMT1LQ7Z2T5 733 aaKnown RBP13.77□□□□□ -0.2
DDX11-223ENST00000542838 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 DDX1Q92499 740 aaKnown RBP13.77□□□□□ -0.2
DDX11-223ENST00000542838 SAAL1Q96ER3 474 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 C9orf72Q96LT7 481 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 RIT2Q99578 217 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 MXRA8Q9BRK3 442 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 PITPNM3Q9BZ71 974 aa13.77□□□□□ -0.2
DDX11-223ENST00000542838 R3HDM2Q9Y2K5 976 aaKnown RBP13.77□□□□□ -0.2
DDX11-223ENST00000542838 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 KRT5P13647 590 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 TAC1P20366 129 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 RARRES1P49788 294 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 PEX3P56589 373 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 SNRNP35Q16560 246 aaKnown RBP13.77□□□□□ -0.21
DDX11-223ENST00000542838 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
DDX11-223ENST00000542838 BATF3Q9NR55 127 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 GSTTP1A0A1W2PQM5 241 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 NEBLO76041 1014 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 FOXN2P32314 431 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 TMED2Q15363 201 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 ACER1Q8TDN7 264 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 GRAMD1AQ96CP6 724 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 FAM118BQ9BPY3 351 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 TMX4Q9H1E5 349 aaPredicted RBP13.77□□□□□ -0.21
DDX11-223ENST00000542838 ETNK1Q9HBU6 452 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 ARHGEF10LQ9HCE6 1279 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.21
DDX11-223ENST00000542838 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX11-223ENST00000542838 RASA4BC9J798 803 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 RASA4O43374 803 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 CCNB1P14635 433 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 RRM1P23921 792 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 IL9RQ01113 521 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 STAT4Q14765 748 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 ZNF365Q70YC5 407 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 BZW1Q7L1Q6 419 aaKnown RBP13.76□□□□□ -0.21
DDX11-223ENST00000542838 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 TAS1R2Q8TE23 839 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 FAXDC2Q96IV6 333 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 TRIM6Q9C030 488 aaPredicted RBP13.76□□□□□ -0.21
DDX11-223ENST00000542838 TMEM8AQ9HCN3 771 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
DDX11-223ENST00000542838 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 SLX4Q8IY92 1834 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 SKIV2L2P42285 1042 aaKnown RBP13.76□□□□□ -0.21
DDX11-223ENST00000542838 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 GRIPAP1Q4V328 841 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 IZUMO3Q5VZ72 239 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 ANKLE1Q8NAG6 615 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 FBXL13Q8NEE6 735 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
DDX11-223ENST00000542838 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
DDX11-223ENST00000542838 TOM1O60784 492 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
DDX11-223ENST00000542838 UNC5CO95185 931 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 RALAP11233 206 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
DDX11-223ENST00000542838 ITGB5P18084 799 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 GPC3P51654 580 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 CENPCQ03188 943 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 DAB2IPQ5VWQ8 1189 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 PRUNE1Q86TP1 453 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 MCOLN2Q8IZK6 566 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 RAB3IPQ96QF0 476 aaPredicted RBP13.75□□□□□ -0.21
DDX11-223ENST00000542838 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 KCNH7Q9NS40 1196 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 ACTL7BQ9Y614 415 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 TMEM150BA6NC51 233 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 KCNA4P22459 653 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 SLC1A1P43005 524 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 SNRPFP62306 86 aaKnown RBP13.75□□□□□ -0.21
DDX11-223ENST00000542838 CCDC15Q0P6D6 951 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 BBOF1Q8ND07 529 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 CPA5Q8WXQ8 436 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 DDX27Q96GQ7 796 aaKnown RBP13.75□□□□□ -0.21
DDX11-223ENST00000542838 IWS1Q96ST2 819 aa13.75□□□□□ -0.21
DDX11-223ENST00000542838 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX11-223ENST00000542838 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms