RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 RPL9P32969 192 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 KCNJ6P48051 423 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 SPAG1Q07617 926 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 DSC1Q08554 894 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 KCNH2Q12809 1159 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 NR1I3Q14994 352 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 TPD52L1Q16890 204 aaPredicted RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 DUOXA2Q1HG44 320 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 ZACNQ401N2 412 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 NOMO2Q5JPE7 1267 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 MIIPQ5JXC2 388 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 SMYD5Q6GMV2 418 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 JADE1Q6IE81 842 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 CD300LGQ6UXG3 332 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 SV2AQ7L0J3 742 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 TRAPPC11Q7Z392 1133 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 USP37Q86T82 979 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 LUZP1Q86V48 1076 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 HERC6Q8IVU3 1022 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 EFCAB13Q8IY85 973 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 COLGALT2Q8IYK4 626 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 CMTR2Q8IYT2 770 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 AOPEPQ8N6M6 819 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 FAXDC2Q96IV6 333 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 CNOT6LQ96LI5 555 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 POP1Q99575 1024 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 RAD9AQ99638 391 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 TMEM175Q9BSA9 504 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 TUBGCP2Q9BSJ2 902 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 MTIF3Q9H2K0 278 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 CWH43Q9H720 699 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 KLK14Q9P0G3 267 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 PCDH10Q9P2E7 1040 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 LRFN2Q9ULH4 789 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 UBQLN1Q9UMX0 589 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 TDRD15B5MCY1 1934 aaKnown RBP6.36□□□□□ -1.39
ABCF1-207ENST00000542772 COL4A6Q14031 1691 aa6.36□□□□□ -1.39
ABCF1-207ENST00000542772 RALGAPA2Q2PPJ7 1873 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 PTPRJQ12913 1337 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 A0A1W2PPC1 479 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 GTPBP10A4D1E9 387 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 CARNS1A5YM72 827 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 KCNJ18B7U540 433 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 XPOTO43592 962 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 STX10O60499 249 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 UPP2O95045 317 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 STAU1O95793 577 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 FGFR1P11362 822 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 HARSP12081 509 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 ATP2A2P16615 1042 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 TNNI1P19237 187 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 CDK11BP21127 795 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 MLH1P40692 756 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 SCNN1GP51170 649 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 PPP3CAQ08209 521 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 KCNMA1Q12791 1236 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 GRIK3Q13003 919 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 TUSC3Q13454 348 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 KCNJ12Q14500 433 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 KRT31Q15323 416 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 MAN2A1Q16706 1144 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 UPP1Q16831 310 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 CCDC40Q4G0X9 1142 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 VWA3BQ502W6 1294 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 KRT39Q6A163 491 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 SCARA3Q6AZY7 606 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 DPY19L2P1Q6NXN4 242 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 DCLRE1AQ6PJP8 1040 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 LIMS2Q7Z4I7 341 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 ZNF280BQ86YH2 543 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 C1orf127Q8N9H9 656 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 EHBP1Q8NDI1 1231 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 OR5B17Q8NGF7 314 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 LMO3Q8TAP4 145 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 HELQQ8TDG4 1101 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 CLP1Q92989 425 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 DDX27Q96GQ7 796 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 UROC1Q96N76 676 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 FNBP1Q96RU3 617 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 CGRRF1Q99675 332 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 APOL6Q9BWW8 343 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 MRPL9Q9BYD2 267 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 UBE2OQ9C0C9 1292 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 NDST4Q9H3R1 872 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 NRDE2Q9H7Z3 1164 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 VRTNQ9H8Y1 702 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 TMEM8AQ9HCN3 771 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 RTN4Q9NQC3 1192 aaKnown RBP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 SLC38A7Q9NVC3 462 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 TBC1D13Q9NVG8 400 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 DPP3Q9NY33 737 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
ABCF1-207ENST00000542772 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.35□□□□□ -1.39
ABCF1-207ENST00000542772 A0A1B0GTH6 734 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 FSD2A1L4K1 749 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ZBBXA8MT70 800 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 GOLGA6L19H0YKK7 550 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 TMEM189-UBE2V1I3L0A0 370 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms