RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 PCDHA13Q9Y5I0 950 aa4.56□□□□□ -1.68
LDHB-209ENST00000542765 ACTL7AQ9Y615 435 aa4.56□□□□□ -1.68
LDHB-209ENST00000542765 GOLGA6L6A8MZA4 724 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 PJA2O43164 708 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 RAP2AP10114 183 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 IL2RBP14784 551 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 ATP8B2P98198 1209 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 MTM1Q13496 603 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 MLC1Q15049 377 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 BMT2Q1RMZ1 405 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 ZNF627Q7L945 461 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 SYT12Q8IV01 421 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 ULK2Q8IYT8 1036 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 MIER2Q8N344 545 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 RNF169Q8NCN4 708 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 ZNF483Q8TF39 744 aaPredicted RBP4.55□□□□□ -1.68
LDHB-209ENST00000542765 TFAP2CQ92754 450 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 KAT5Q92993 513 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 CHFRQ96EP1 664 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 CYFIP2Q96F07 1278 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 MRI1Q9BV20 369 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 SPON1Q9HCB6 807 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 TCF7L1Q9HCS4 588 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 MOCS1Q9NZB8 636 aa4.55□□□□□ -1.68
LDHB-209ENST00000542765 PNPLA7Q6ZV29 1317 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 MYBBP1AQ9BQG0 1328 aaKnown RBP4.54□□□□□ -1.68
LDHB-209ENST00000542765 SNRPA1P09661 255 aaKnown RBP4.54□□□□□ -1.68
LDHB-209ENST00000542765 DDCP20711 480 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 PTTG1IPP53801 180 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 CLRN1P58418 232 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 TGFB2P61812 414 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 CDC42EP1Q00587 391 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 FAM102BQ5T8I3 360 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 OTUD7BQ6GQQ9 843 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 EFCAB12Q6NXP0 572 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 DRICH1Q6PGQ1 229 aaPredicted RBP4.54□□□□□ -1.68
LDHB-209ENST00000542765 CATIPQ7Z7H3 387 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 OR10H5Q8NGA6 315 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 MYOCQ99972 504 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 IKZF4Q9H2S9 585 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 SLC2A4RGQ9NR83 387 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 TDP1Q9NUW8 608 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 SLC23A1Q9UHI7 598 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 CLCA2Q9UQC9 943 aa4.54□□□□□ -1.68
LDHB-209ENST00000542765 RUVBL1Q9Y265 456 aaKnown RBP4.54□□□□□ -1.68
LDHB-209ENST00000542765 LEFTY2O00292 366 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 SGTAO43765 313 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 RFPL1O75677 317 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 ATF3P18847 181 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 ATP5JP18859 108 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 MAKP20794 623 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 APOBEC3AP31941 199 aaPredicted RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 CYP2C19P33261 490 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 RAP2BP61225 183 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 HSP90AB2PQ58FF8 381 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 RABL3Q5HYI8 236 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 RRP12Q5JTH9 1297 aaKnown RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 ATXN7L2Q5T6C5 722 aaPredicted RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 IFIT1BQ5T764 474 aaKnown RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 SEM1Q6ZVN7 128 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 NOL8Q76FK4 1167 aaKnown RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 TCEAL8Q8IYN2 117 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 DCBLD1Q8N8Z6 715 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 ZFP28Q8NHY6 868 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 TTC8Q8TAM2 541 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 IFI44Q8TCB0 444 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 CLIP3Q96DZ5 547 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 TMX3Q96JJ7 454 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 CAMKK2Q96RR4 588 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 NDC1Q9BTX1 674 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 ANLNQ9NQW6 1124 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 PNMA8BQ9ULN7 279 aaPredicted RBP4.53□□□□□ -1.68
LDHB-209ENST00000542765 PCDHB1Q9Y5F3 818 aa4.53□□□□□ -1.68
LDHB-209ENST00000542765 TEX33O43247 280 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 AP1G1O43747 822 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 FAM20BO75063 409 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 VCAM1P19320 739 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 PDCP20941 246 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 NR4A1P22736 598 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 MGAT1P26572 445 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 ZFP36P26651 326 aaKnown RBP4.52□□□□□ -1.69
LDHB-209ENST00000542765 FXR1P51114 621 aaKnown RBP eCLIP4.52□□□□□ -1.69
LDHB-209ENST00000542765 INHBCP55103 352 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 ZNF267Q14586 743 aaPredicted RBP4.52□□□□□ -1.69
LDHB-209ENST00000542765 ZNF529Q6P280 563 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 MRGPREQ86SM8 312 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 RSPH3Q86UC2 560 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 PLXDC1Q8IUK5 500 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 DRC7Q8IY82 874 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 MAGEB6Q8N7X4 407 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 NSUN6Q8TEA1 469 aaKnown RBP4.52□□□□□ -1.69
LDHB-209ENST00000542765 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
LDHB-209ENST00000542765 LENG9Q96B70 501 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 MRGPRX4Q96LA9 322 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 DMRTA2Q96SC8 542 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 NUP88Q99567 741 aaPredicted RBP4.52□□□□□ -1.69
LDHB-209ENST00000542765 POGKQ9P215 609 aa4.52□□□□□ -1.69
LDHB-209ENST00000542765 EIF2B4Q9UI10 523 aaKnown RBP4.52□□□□□ -1.69
LDHB-209ENST00000542765 SORCS3Q9UPU3 1222 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms