RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 BFSP1Q12934 665 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ZNF568Q3ZCX4 644 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PPP1R13LQ8WUF5 828 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 DHX38Q92620 1227 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 MSTO1Q9BUK6 570 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 NOC4LQ9BVI4 516 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CHST12Q9NRB3 414 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PRKAG3Q9UGI9 489 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 EP300Q09472 2414 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CEP250Q9BV73 2442 aa13.37□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 A0A1W2PQC6 194 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PRR23AA6NEV1 266 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TISP43B9A030 160 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 GPR182O15218 404 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PMM2O15305 246 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 N4BP1O75113 896 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 RPS6KA5O75582 802 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 IRS1P35568 1242 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CASP4P49662 377 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 NR1I3Q14994 352 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 SURF1Q15526 300 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 VWA3BQ502W6 1294 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 SLC27A1Q6PCB7 646 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ATOH1Q92858 354 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 WNT8BQ93098 351 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 IQCDQ96DY2 449 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CNTNAP3BQ96NU0 1288 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PPP1R16BQ96T49 567 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TCHPQ9BT92 498 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CNTNAP3Q9BZ76 1288 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 IKZF4Q9H2S9 585 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 NDST4Q9H3R1 872 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 HIPK3Q9H422 1215 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PDZD7Q9H5P4 517 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 GINS2Q9Y248 185 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ITIH6Q6UXX5 1313 aa13.36□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 GTPBP10A4D1E9 387 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 P4HA2O15460 535 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 B4GALT5O43286 388 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 AP5Z1O43299 807 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 FAM189A1O60320 539 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CHRNA1P02708 482 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CKBP12277 381 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 GTF2H1P32780 548 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 MATR3P43243 847 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 FAM228AQ86W67 206 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 BRSK2Q8IWQ3 736 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 SLC35C1Q96A29 364 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 EEF2KMTQ96G04 330 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TRPV6Q9H1D0 765 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 WNT8AQ9H1J5 351 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CDT1Q9H211 546 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PCIF1Q9H4Z3 704 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TAB2Q9NYJ8 693 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 FAM208BQ5VWN6 2430 aa13.35□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 GOLGA6L6A8MZA4 724 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CLTAP09496 248 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CTSHP09668 335 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 SELPP16109 830 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 VAMP7P51809 220 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 AP3M2P53677 418 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CCL23P55773 120 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CLDN10P78369 228 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PSMD6Q15008 389 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 EDAQ92838 391 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 PBXIP1Q96AQ6 731 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
CACNA1C-IT3-201ENST00000542680 NAP1L5Q96NT1 182 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms