RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 MAGEF1Q9HAY2 307 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 SLC38A7Q9NVC3 462 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 PANK4Q9NVE7 773 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 FAM13BQ9NYF5 915 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 PRKAG3Q9UGI9 489 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 SF3B1O75533 1304 aaKnown RBP eCLIP16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 TRIOO75962 3097 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 IDEP14735 1019 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 EPCAMP16422 314 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 CA8P35219 290 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 CLCN4P51793 760 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 CLCNKBP51801 687 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 CASP5P51878 434 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 AMPD3Q01432 767 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 ZBTB41Q5SVQ8 909 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 ADALQ6DHV7 355 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 PPFIBP1Q86W92 1011 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 B3GALT6Q96L58 329 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 C7orf25Q9BPX7 421 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 IKZF4Q9H2S9 585 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 GOLGA2P5Q9HBQ8 144 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 CD320Q9NPF0 282 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 KCNH3Q9ULD8 1083 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 VWA8A3KMH1 1905 aa16.86■□□□□ 0.29
ECHDC2-223ENST00000542552 PLXNA3P51805 1871 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 C19orf67A6NJJ6 358 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 TISP43B9A030 160 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 C2CD2LO14523 706 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 TEX28O15482 410 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 C1RP00736 705 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 CXCL8P10145 99 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 CMA1P23946 247 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 TNFSF9P41273 254 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 MATR3P43243 847 aaKnown RBP eCLIP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 ZP2Q05996 745 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 KCNA1Q09470 495 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 ALCAMQ13740 583 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 ZBTB6Q15916 424 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 ENOX2Q16206 610 aaKnown RBP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 ADHFE1Q8IWW8 467 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 TMEM87AQ8NBN3 555 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 C3orf58Q8NDZ4 430 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 HASPINQ8TF76 798 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 C18orf25Q96B23 403 aaPredicted RBP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 MSTO1Q9BUK6 570 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 FGFBP2Q9BYJ0 223 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 DZANK1Q9NVP4 752 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 FNIP2Q9P278 1114 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 CPSF3Q9UKF6 684 aaKnown RBP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 USP15Q9Y4E8 981 aaPredicted RBP16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
ECHDC2-223ENST00000542552 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 B3GAT3O94766 335 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 MYBP10242 640 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 KLRC2P26717 231 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 ADSSP30520 456 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 RPL9P32969 192 aaKnown RBP16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 ELAVL2Q12926 359 aaKnown RBP16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 RTP2Q5QGT7 225 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 FAM171A1Q5VUB5 890 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 SLFN12LQ6IEE8 588 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 KIAA1841Q6NSI8 718 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 ACCSQ96QU6 501 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 TSPAN18Q96SJ8 248 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 PYM1Q9BRP8 204 aaKnown RBP16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 TTPALQ9BTX7 342 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 SCAND2PQ9GZW5 306 aaPredicted RBP16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 HPSEQ9Y251 543 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 ANK1P16157 1881 aa16.84■□□□□ 0.29
ECHDC2-223ENST00000542552 LACTBL1A8MY62 500 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 GCNT3O95395 438 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 ADH1AP07327 375 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 SLFN14P0C7P3 912 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 FGFR3P22607 806 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 POU5F1Q01860 360 aaKnown RBP16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 EHHADHQ08426 723 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 PIK3R5Q8WYR1 880 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 FBXL18Q96ME1 805 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 EXOC7Q9UPT5 735 aa16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 MTCL1Q9Y4B5 1905 aaKnown RBP16.83■□□□□ 0.28
ECHDC2-223ENST00000542552 PODXLO00592 558 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 PFKFB1P16118 471 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 CREMQ03060 361 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 ITIH3Q06033 890 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 PPP2R3AQ06190 1150 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 POSTNQ15063 836 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 LILRA6Q6PI73 481 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 CRELD2Q6UXH1 353 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms