RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 PHC1P78364 1004 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 GPR158Q5T848 1215 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 PCSK4Q6UW60 755 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 MRGPRGQ86SM5 289 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 MRGPREQ86SM8 312 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 VRK3Q8IV63 474 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 ENAHQ8N8S7 591 aaPredicted RBP6.42□□□□□ -1.38
CIT-211ENST00000541841 SLC5A5Q92911 643 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 AIFM3Q96NN9 605 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 MAN1C1Q9NR34 630 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 DMRT1Q9Y5R6 373 aa6.42□□□□□ -1.38
CIT-211ENST00000541841 A0A1W2PR48 441 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 A6NNZ2 444 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
CIT-211ENST00000541841 ZRANB2O95218 330 aaKnown RBP eCLIP6.41□□□□□ -1.38
CIT-211ENST00000541841 ZFP36P26651 326 aaKnown RBP6.41□□□□□ -1.38
CIT-211ENST00000541841 SCAND1P57086 179 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 SESN3P58005 492 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 ZNF280AP59817 542 aaPredicted RBP6.41□□□□□ -1.38
CIT-211ENST00000541841 DUSP2Q05923 314 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 DDB1Q16531 1140 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 TOGARAM2Q6ZUX3 1019 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 PAF1Q8N7H5 531 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 ANKRD42Q8N9B4 389 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 GJA10Q969M2 543 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 PLCB1Q9NQ66 1216 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 DDX21Q9NR30 783 aaKnown RBP eCLIP6.41□□□□□ -1.38
CIT-211ENST00000541841 PRSS50Q9UI38 385 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 KAT6BQ8WYB5 2073 aa6.41□□□□□ -1.38
CIT-211ENST00000541841 NRP1O14786 923 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 PIP5K1CO60331 668 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 PRAMEF4O60810 478 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 NBNO60934 754 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 PEX11BO96011 259 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 XPAP23025 273 aaPredicted RBP6.4□□□□□ -1.38
CIT-211ENST00000541841 BDNFP23560 247 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 APOBEC3AP31941 199 aaPredicted RBP6.4□□□□□ -1.38
CIT-211ENST00000541841 HALP42357 657 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 FAM189BP81408 668 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 OCRLQ01968 901 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 FAPQ12884 760 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 CHAF1AQ13111 956 aaPredicted RBP6.4□□□□□ -1.38
CIT-211ENST00000541841 ZNF267Q14586 743 aaPredicted RBP6.4□□□□□ -1.38
CIT-211ENST00000541841 UBE3CQ15386 1083 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 CT83Q5H943 113 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 IFIT1BQ5T764 474 aaKnown RBP6.4□□□□□ -1.38
CIT-211ENST00000541841 WDR78Q5VTH9 848 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 XRRA1Q6P2D8 792 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 C1orf228Q6PIY5 440 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 LMBR1LQ6UX01 489 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 B3GNT9Q6UX72 402 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 ABHD15Q6UXT9 468 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 TAS1R1Q7RTX1 841 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 ULK2Q8IYT8 1036 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 HAS1Q92839 578 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 TTC17Q96AE7 1141 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 SENP7Q9BQF6 1050 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 LUZP4Q9P127 313 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 FBXO9Q9UK97 447 aaPredicted RBP6.4□□□□□ -1.38
CIT-211ENST00000541841 LZTS1Q9Y250 596 aa6.4□□□□□ -1.38
CIT-211ENST00000541841 AP1G1O43747 822 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 RAMP2O60895 175 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 TMEM127O75204 238 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 HSPA6P17066 643 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 PTGS2P35354 604 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 USP14P54578 494 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 INHBEP58166 350 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 STK3Q13188 491 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 MRPL49Q13405 166 aaKnown RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 PDCD1Q15116 288 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 CLUL1Q15846 466 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 CSRP2Q16527 193 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 SMN1Q16637 294 aaKnown RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 PITRM1Q5JRX3 1037 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 ANKS6Q68DC2 871 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 NAIF1Q69YI7 327 aaPredicted RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 FRMD7Q6ZUT3 714 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 SRLQ86TD4 932 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 SLC41A1Q8IVJ1 513 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 OR52N2Q8NGI0 321 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 TEKT5Q96M29 485 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 NUP88Q99567 741 aaPredicted RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 TMX4Q9H1E5 349 aaPredicted RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 NMRK2Q9NPI5 230 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 KLHL11Q9NVR0 708 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 MAP3K20Q9NYL2 800 aaKnown RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 EIF2B4Q9UI10 523 aaKnown RBP6.39□□□□□ -1.39
CIT-211ENST00000541841 MRFAP1Q9Y605 127 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 NUMBLQ9Y6R0 609 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 ZMYM3Q14202 1370 aa6.39□□□□□ -1.39
CIT-211ENST00000541841 AHRRA9YTQ3 701 aa6.38□□□□□ -1.39
CIT-211ENST00000541841 LEFTY2O00292 366 aa6.38□□□□□ -1.39
CIT-211ENST00000541841 LPXNO60711 386 aa6.38□□□□□ -1.39
CIT-211ENST00000541841 GZMKP49863 264 aa6.38□□□□□ -1.39
CIT-211ENST00000541841 KRT85P78386 507 aa6.38□□□□□ -1.39
CIT-211ENST00000541841 ACAP2Q15057 778 aa6.38□□□□□ -1.39
CIT-211ENST00000541841 RRP12Q5JTH9 1297 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms