RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SOWAHDA6NJG2 315 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 ZBBXA8MT70 800 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 ENPP3O14638 875 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 N4BP1O75113 896 aaKnown RBP30.06■■■□□ 2.4
CCM2-218ENST00000541586 HARSP12081 509 aaKnown RBP30.06■■■□□ 2.4
CCM2-218ENST00000541586 MCL1Q07820 350 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 KLHDC7AQ5VTJ3 777 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 WDR59Q6PJI9 974 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 ZBTB33Q86T24 672 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 USP37Q86T82 979 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 SIX2Q9NPC8 291 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 NLRC4Q9NPP4 1024 aa30.06■■■□□ 2.4
CCM2-218ENST00000541586 EEF1DP3Q658K8 133 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 E4F1Q66K89 784 aaPredicted RBP30.05■■■□□ 2.4
CCM2-218ENST00000541586 MPZL3Q6UWV2 235 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 RRAGAQ7L523 313 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 TMTC1Q8IUR5 882 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 POP1Q99575 1024 aaKnown RBP30.05■■■□□ 2.4
CCM2-218ENST00000541586 EIF2AQ9BY44 585 aaKnown RBP30.05■■■□□ 2.4
CCM2-218ENST00000541586 PDZD7Q9H5P4 517 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 TULP1O00294 542 aaPredicted RBP30.05■■■□□ 2.4
CCM2-218ENST00000541586 P4HA2O15460 535 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 FAM189A1O60320 539 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 DSC3Q14574 896 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 MEA1Q16626 185 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 PSRC1Q6PGN9 363 aaPredicted RBP30.05■■■□□ 2.4
CCM2-218ENST00000541586 TRIM65Q6PJ69 517 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 CYP26C1Q6V0L0 522 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 ADPGKQ9BRR6 497 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 TRIM6Q9C030 488 aaPredicted RBP30.05■■■□□ 2.4
CCM2-218ENST00000541586 TMEM117Q9H0C3 514 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 SPTLC3Q9NUV7 552 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 TNFSF13BQ9Y275 285 aa30.05■■■□□ 2.4
CCM2-218ENST00000541586 LRRC53A6NM62 1247 aa30.04■■■□□ 2.4
CCM2-218ENST00000541586 PSMD6Q15008 389 aa30.04■■■□□ 2.4
CCM2-218ENST00000541586 LINC01599Q8WXQ3 324 aa30.04■■■□□ 2.4
CCM2-218ENST00000541586 RGS18Q9NS28 235 aa30.04■■■□□ 2.4
CCM2-218ENST00000541586 RBAKQ9NYW8 714 aaPredicted RBP30.04■■■□□ 2.4
CCM2-218ENST00000541586 PLAGL2Q9UPG8 496 aa30.04■■■□□ 2.4
CCM2-218ENST00000541586 PMM2O15305 246 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 NPTXRO95502 500 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 DLATP10515 647 aaKnown RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 UCHL3P15374 230 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 HNRNPH3P31942 346 aaKnown RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 MXI1P50539 228 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 MTF1Q14872 753 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 ZNF568Q3ZCX4 644 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 SEZ6Q53EL9 994 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 PDE4DIPQ5VU43 2346 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 PDXDC1Q6P996 788 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 SLC27A1Q6PCB7 646 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 RAD9BQ6WBX8 426 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.03■■■□□ 2.4
CCM2-218ENST00000541586 CHP1Q99653 195 aa30.03■■■□□ 2.4
CCM2-218ENST00000541586 UBE2OQ9C0C9 1292 aaKnown RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 INTS2Q9H0H0 1204 aaKnown RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 TSPYL2Q9H2G4 693 aaPredicted RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 TOPORSQ9NS56 1045 aaPredicted RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 ZNHIT6Q9NWK9 470 aaKnown RBP30.03■■■□□ 2.4
CCM2-218ENST00000541586 ABHD14A-ACY1A0A1B0GW23 586 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 OGTO15294 1046 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 CETN1Q12798 172 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 LMO3Q8TAP4 145 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 KCND1Q9NSA2 647 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 LOC101059915A0A1B0GWI6 518 aaPredicted RBP30.02■■■□□ 2.4
CCM2-218ENST00000541586 GTF2H1P32780 548 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 WNT7BP56706 349 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 SLC24A5Q71RS6 500 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 CCAR2Q8N163 923 aaKnown RBP30.02■■■□□ 2.4
CCM2-218ENST00000541586 RNF169Q8NCN4 708 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 TMEM8AQ9HCN3 771 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 FAM105AQ9NUU6 356 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 FBXL5Q9UKA1 691 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 FHOD1Q9Y613 1164 aa30.02■■■□□ 2.4
CCM2-218ENST00000541586 USP27XA6NNY8 438 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 CLDN10P78369 228 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 EPC2Q52LR7 807 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 UBXN11Q5T124 520 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 KRT39Q6A163 491 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 TOGARAM2Q6ZUX3 1019 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 EHBP1Q8NDI1 1231 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 GDF15Q99988 308 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 PDE11AQ9HCR9 933 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 HES2Q9Y543 173 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 PCDHB2Q9Y5E7 798 aa30.01■■■□□ 2.39
CCM2-218ENST00000541586 TNFSF9P41273 254 aa30■■■□□ 2.39
CCM2-218ENST00000541586 C9orf50Q5SZB4 431 aa30■■■□□ 2.39
CCM2-218ENST00000541586 FNBP1Q96RU3 617 aa30■■■□□ 2.39
CCM2-218ENST00000541586 NUCKS1Q9H1E3 243 aaKnown RBP30■■■□□ 2.39
CCM2-218ENST00000541586 CDT1Q9H211 546 aa30■■■□□ 2.39
CCM2-218ENST00000541586 TRMT1Q9NXH9 659 aaKnown RBP30■■■□□ 2.39
CCM2-218ENST00000541586 CXXC1Q9P0U4 656 aaPredicted RBP30■■■□□ 2.39
CCM2-218ENST00000541586 BAIAP3O94812 1187 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 UPP2O95045 317 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 OSTNP61366 133 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 GJB7Q6PEY0 223 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 APOL6Q9BWW8 343 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 C1orf112Q9NSG2 853 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 A0A0U1RQF3 1178 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 C9IYK1 514 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms