RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
CHFR-219ENST00000541341 FMO2Q99518 471 aa11.17□□□□□ -0.62
CHFR-219ENST00000541341 AP5M1Q9H0R1 490 aa11.17□□□□□ -0.62
CHFR-219ENST00000541341 CARD9Q9H257 536 aa11.17□□□□□ -0.62
CHFR-219ENST00000541341 HIPK3Q9H422 1215 aa11.17□□□□□ -0.62
CHFR-219ENST00000541341 CTNNAL1Q9UBT7 734 aa11.17□□□□□ -0.62
CHFR-219ENST00000541341 YBX2Q9Y2T7 364 aaKnown RBP11.17□□□□□ -0.62
CHFR-219ENST00000541341 XIRP2A4UGR9 3374 aa11.17□□□□□ -0.62
CHFR-219ENST00000541341 SMCO2A6NFE2 343 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 ZBBXA8MT70 800 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 MARCH6O60337 910 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 B4GALT4O60513 344 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 HNRNPCL1O60812 293 aaKnown RBP11.16□□□□□ -0.62
CHFR-219ENST00000541341 WFS1O76024 890 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 SUN1O94901 812 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 CD4P01730 458 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 HPDP32754 393 aaPredicted RBP11.16□□□□□ -0.62
CHFR-219ENST00000541341 GUCY2FP51841 1108 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 SH3BGRP55822 239 aaPredicted RBP11.16□□□□□ -0.62
CHFR-219ENST00000541341 GHRHRQ02643 423 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 CAV1Q03135 178 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 LETM2Q2VYF4 491 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 TKFCQ3LXA3 575 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 LRRC55Q6ZSA7 311 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 FBXO11Q86XK2 927 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 TRIM59Q8IWR1 403 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 RHOT2Q8IXI1 618 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 KIAA0895Q8NCT3 520 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 TBC1D5Q92609 795 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 TLCD1Q96CP7 247 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
CHFR-219ENST00000541341 AMNQ9BXJ7 453 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 PABPC3Q9H361 631 aaKnown RBP11.16□□□□□ -0.62
CHFR-219ENST00000541341 CERS4Q9HA82 394 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 SLC39A2Q9NP94 309 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 IL23AQ9NPF7 189 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 CCPG1Q9ULG6 757 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 NFS1Q9Y697 457 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 MUC3AQ02505 3323 aa11.16□□□□□ -0.62
CHFR-219ENST00000541341 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 RFXAPO00287 272 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 BUB1O43683 1085 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 FGBP02675 491 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 MYL3P08590 195 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 CYP2C9P11712 490 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 CHRNA3P32297 505 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 CXCR5P32302 372 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 TECP42680 631 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 RASSF2P50749 326 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 HADHBP55084 474 aaKnown RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 ATP11AP98196 1134 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 ZNF268Q14587 947 aaPredicted RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 TCEAL1Q15170 157 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 TMEM119Q4V9L6 283 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 LRCH2Q5VUJ6 765 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 TAPT1Q6NXT6 567 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 TMC3Q7Z5M5 1100 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 SLFN12Q8IYM2 578 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 SH2D3CQ8N5H7 860 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 SAMD3Q8N6K7 520 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 UBL4BQ8N7F7 174 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 RAPGEF5Q92565 580 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 MTMR9Q96QG7 549 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 WNT8AQ9H1J5 351 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 EBF2Q9HAK2 575 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 TRMT13Q9NUP7 481 aaKnown RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 PANK4Q9NVE7 773 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 HAUS2Q9NVX0 235 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 MSRAQ9UJ68 235 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.62
CHFR-219ENST00000541341 NOVA2Q9UNW9 492 aaKnown RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.62
CHFR-219ENST00000541341 SCN10AQ9Y5Y9 1956 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 TRANK1O15050 2925 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 ASB14A6NK59 587 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 F8VZ95 297 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 NFIBO00712 420 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 PDXKO00764 312 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 RGS16O15492 202 aaPredicted RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 LMNAP02545 664 aaKnown RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 PLEKP08567 350 aaPredicted RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 TMEM253P0C7T8 217 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 KLRC1P26715 233 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 STAT1P42224 750 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 MMP13P45452 471 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 ADCY7P51828 1080 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 PTENP60484 403 aa11.14□□□□□ -0.63
CHFR-219ENST00000541341 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
CHFR-219ENST00000541341 NR1H3Q13133 447 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms