RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 MIGA2Q7L4E1 593 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CTU1Q7Z7A3 348 aaKnown RBP6.88□□□□□ -1.31
SUDS3-202ENST00000541280 ARMC5Q96C12 935 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CLMNQ96JQ2 1002 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 ALG1Q9BT22 464 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 LRRCC1Q9C099 1032 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 CCDC8Q9H0W5 538 aaPredicted RBP6.88□□□□□ -1.31
SUDS3-202ENST00000541280 IPPKQ9H8X2 491 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 PPP4R1LQ9P1A2 415 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 HERC5Q9UII4 1024 aaKnown RBP6.88□□□□□ -1.31
SUDS3-202ENST00000541280 DBNLQ9UJU6 430 aaKnown RBP6.88□□□□□ -1.31
SUDS3-202ENST00000541280 ADAM29Q9UKF5 820 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 DSEQ9UL01 958 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 EXOC6BQ9Y2D4 811 aa6.88□□□□□ -1.31
SUDS3-202ENST00000541280 AQP7O14520 342 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 KLHL18O94889 574 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 KNG1P01042 644 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 LTFP02788 710 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 C6orf222P0C671 652 aaPredicted RBP6.87□□□□□ -1.31
SUDS3-202ENST00000541280 ATP5JP18859 108 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 RHBDL3P58872 404 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
SUDS3-202ENST00000541280 NFATC3Q12968 1075 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 SMAD2Q15796 467 aaKnown RBP6.87□□□□□ -1.31
SUDS3-202ENST00000541280 LONRF2Q1L5Z9 754 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 TRMT10BQ6PF06 316 aaKnown RBP6.87□□□□□ -1.31
SUDS3-202ENST00000541280 FASTKD5Q7L8L6 764 aaKnown RBP6.87□□□□□ -1.31
SUDS3-202ENST00000541280 TEX11Q8IYF3 940 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 GPATCH3Q96I76 525 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 GPR20Q99678 358 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.87□□□□□ -1.313e-6■□□□□ 9.6
SUDS3-202ENST00000541280 OSBPL5Q9H0X9 879 aaPredicted RBP6.87□□□□□ -1.31
SUDS3-202ENST00000541280 DCTPP1Q9H773 170 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 KCND1Q9NSA2 647 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 SIRPGQ9P1W8 387 aa6.87□□□□□ -1.31
SUDS3-202ENST00000541280 TAF1P21675 1872 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 CCL15-CCL14A0A0B4J2E2 113 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ZNF839A8K0R7 811 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 IDH1O75874 414 aaKnown RBP6.86□□□□□ -1.31
SUDS3-202ENST00000541280 HLA-DOAP06340 250 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
SUDS3-202ENST00000541280 SERINC3Q13530 473 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 KIF22Q14807 665 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 CCL15Q16663 113 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ZSCAN25Q6NSZ9 544 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ANKRD23Q86SG2 305 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 RBM12BQ8IXT5 1001 aaKnown RBP6.86□□□□□ -1.31
SUDS3-202ENST00000541280 KBTBD2Q8IY47 623 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 SCYL3Q8IZE3 742 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 SH3RF2Q8TEC5 729 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 PTPRN2Q92932 1015 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ERO1AQ96HE7 468 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ABHD8Q96I13 439 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 LOXL4Q96JB6 756 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 KCNJ15Q99712 375 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.86□□□□□ -1.31
SUDS3-202ENST00000541280 BARX1Q9HBU1 254 aaPredicted RBP6.86□□□□□ -1.31
SUDS3-202ENST00000541280 IL1RAPL2Q9NP60 686 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 SLC45A1Q9Y2W3 748 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 PAPPA2Q9BXP8 1791 aa6.86□□□□□ -1.31
SUDS3-202ENST00000541280 ATRNL1Q5VV63 1379 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 DDTLA6NHG4 134 aaPredicted RBP6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ACOT7O00154 380 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 CKMP06732 381 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ZNF20P17024 532 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ATP2B1P20020 1258 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 HOXD10P28358 340 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 RRP1P56182 461 aaKnown RBP6.85□□□□□ -1.31
SUDS3-202ENST00000541280 PPP2CBP62714 309 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 PPP2CAP67775 309 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 SP3Q02447 781 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 PAK1Q13153 545 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 PICALMQ13492 652 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 SKIDA1Q1XH10 827 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 MTERF2Q49AM1 385 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 SLC9C2Q5TAH2 1124 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 C20orf194Q5TEA3 1177 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 GLB1LQ6UWU2 654 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 TICAM2Q86XR7 235 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ZFPM1Q8IX07 1006 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 MAGEB6Q8N7X4 407 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 NUDT10Q8NFP7 164 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ZNF384Q8TF68 577 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 TGFBRAP1Q8WUH2 860 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ZKSCAN4Q969J2 545 aaPredicted RBP6.85□□□□□ -1.31
SUDS3-202ENST00000541280 GCC1Q96CN9 775 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 NUDT11Q96G61 164 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 AJUBAQ96IF1 538 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 PTPN18Q99952 460 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 TANGO6Q9C0B7 1094 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 AS3MTQ9HBK9 375 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 AATFQ9NY61 560 aaKnown RBP eCLIP6.85□□□□□ -1.31
SUDS3-202ENST00000541280 FZD1Q9UP38 647 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms