RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ZMYM2Q9UBW7 1377 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 LRRC10BA6NIK2 292 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 GOLGA6L6A8MZA4 724 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 ARVCFO00192 962 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SLC16A3O15427 465 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 AP5Z1O43299 807 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 TOM1L1O75674 476 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 AKAP3O75969 853 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 PTMAP06454 111 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CTSHP09668 335 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 HARSP12081 509 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 GARTP22102 1010 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SFPQP23246 707 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CASP4P49662 377 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CDK7P50613 346 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CRYBB1P53674 252 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 MRPS6P82932 125 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 UBXN1Q04323 297 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 MBTD1Q05BQ5 628 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CCDC173Q0VFZ6 552 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 NFIL3Q16649 462 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 MAN2A1Q16706 1144 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 DCAF17Q5H9S7 520 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 FKBP15Q5T1M5 1219 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 ATF7IP2Q5U623 682 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 C1orf53Q5VUE5 145 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 ZPBP2Q6X784 338 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 APBB1IPQ7Z5R6 666 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 FRMD5Q7Z6J6 570 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SERINC5Q86VE9 423 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SLC9A9Q8IVB4 645 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 C12orf56Q8IXR9 622 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 GPD1LQ8N335 351 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SPC24Q8NBT2 197 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SAAL1Q96ER3 474 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 MRFAP1L1Q96HT8 127 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 NAP1L5Q96NT1 182 aaPredicted RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 OSMRQ99650 979 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 ADPGKQ9BRR6 497 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 MSTO1Q9BUK6 570 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 SEZ6LQ9BYH1 1024 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CELF4Q9BZC1 486 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 CCDC113Q9H0I3 377 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 TRPV6Q9H1D0 765 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 ADAMTS10Q9H324 1103 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 FZD8Q9H461 694 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 MINDY3Q9H8M7 445 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 KIAA1586Q9HCI6 787 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 TRMT13Q9NUP7 481 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 AGO2Q9UKV8 859 aaKnown RBP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 PCDHB9Q9Y5E1 797 aa7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLTCL1-206ENST00000540896 A0A1B0GTH6 734 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ZNF233A6NK53 670 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 DCDC2CA8MYV0 355 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 KIAA0391O15091 583 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TLR3O15455 904 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 B4GALT5O43286 388 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 PQBP1O60828 265 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 GPR32O75388 356 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 RPS6KA5O75582 802 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 LDHAP00338 332 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 PIGRP01833 764 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 DARSP14868 501 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 FGFR4P22455 802 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 EIF4BP23588 611 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 CDC25BP30305 580 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ADSSP30520 456 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 HOXC8P31273 242 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 MARSP56192 900 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TLE2Q04725 743 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 SRSF11Q05519 484 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 PPP2R3AQ06190 1150 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 PTK7Q13308 1070 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 NR1I3Q14994 352 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 SNX17Q15036 470 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 PCBP1Q15365 356 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 SNRNP35Q16560 246 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 FAM187BQ17R55 369 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 LRRC26Q2I0M4 334 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ZNF568Q3ZCX4 644 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TRIM60Q495X7 471 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 RNFT1Q5M7Z0 435 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 SLC39A4Q6P5W5 647 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 MPZL3Q6UWV2 235 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 INTS8Q75QN2 995 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 USP37Q86T82 979 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 CDR2LQ86X02 465 aaPredicted RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 TRIM59Q8IWR1 403 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ZC3H3Q8IXZ2 948 aaKnown RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 SLC43A3Q8NBI5 491 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 DPF3Q92784 378 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 KCNN1Q92952 543 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 CCDC127Q96BQ5 260 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ZBTB45Q96K62 511 aaPredicted RBP7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 PRIMPOLQ96LW4 560 aa7.22□□□□□ -1.25
CLTCL1-206ENST00000540896 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms