RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 IQCEQ6IPM2 695 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CBWD2Q8IUF1 395 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 PLEKHO2Q8TD55 490 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 TSGA10Q9BZW7 698 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 TRIM10Q9UDY6 481 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 SQORQ9Y6N5 450 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 PDCD11Q14690 1871 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CITO14578 2027 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 TRIP11Q15643 1979 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 A0A1B0GUA9 196 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 DCDC2CA8MYV0 355 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 M0QZ92 97 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 KIAA0391O15091 583 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 KRT86O43790 486 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 SLU7O95391 586 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 SELPP16109 830 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 ANXA13P27216 316 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 KLHL30Q0D2K2 578 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 EPC2Q52LR7 807 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CCDC122Q5T0U0 273 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 LRRC8DQ7L1W4 858 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 IRF2BP2Q7Z5L9 587 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CDR2LQ86X02 465 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 SLC35F6Q8N357 371 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 LMO3Q8TAP4 145 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 BICD1Q96G01 975 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CPB2Q96IY4 423 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 IFIH1Q9BYX4 1025 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 WNT8AQ9H1J5 351 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 CDT1Q9H211 546 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 ERVK-5Q9HDB9 667 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 ATP11BQ9Y2G3 1177 aa13.49□□□□□ -0.25
SMAD3-204ENST00000540846 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
SMAD3-204ENST00000540846 GOLGA8IPA6NC78 632 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 GOLGA8JA6NMD2 632 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 F8VZ95 297 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 PJA2O43164 708 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 URI1O94763 535 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-204ENST00000540846 ERLIN2O94905 339 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 GHRP10912 638 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 CETN1Q12798 172 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 BFSP2Q13515 415 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 HSP90AA2PQ14568 343 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-204ENST00000540846 ZBTB41Q5SVQ8 909 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 GPD1LQ8N335 351 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 PARD3BQ8TEW8 1205 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 KIAA1586Q9HCI6 787 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 GUCA1BQ9UMX6 200 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 PCDHA13Q9Y5I0 950 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 MRFAP1Q9Y605 127 aa13.48□□□□□ -0.25
SMAD3-204ENST00000540846 MICAL3Q7RTP6 2002 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-204ENST00000540846 EXTL3O43909 919 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 NBNO60934 754 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 RPS6KA5O75582 802 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 FERP16591 822 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 CD52P31358 61 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 GTF2H1P32780 548 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 GCLMP48507 274 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 MXI1P50539 228 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 CYP24A1Q07973 514 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 KIF5AQ12840 1032 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 SLC18A3Q16572 532 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 UBXN11Q5T124 520 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 SLFN12LQ6IEE8 588 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 GJB7Q6PEY0 223 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 USP37Q86T82 979 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 FMNL3Q8IVF7 1028 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 HIPK3Q9H422 1215 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 ST3GAL5Q9UNP4 418 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 ATP8B3O60423 1300 aa13.47□□□□□ -0.25
SMAD3-204ENST00000540846 CTAGE9A4FU28 777 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 LRRIQ3A6PVS8 624 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-204ENST00000540846 CLDN3O15551 220 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 CLTBP09497 229 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 ITGB8P26012 769 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 AXLP30530 894 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 SOX5P35711 763 aa13.46□□□□□ -0.25
SMAD3-204ENST00000540846 STAT1P42224 750 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms