RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 METRNLQ641Q3 311 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 FOXR2Q6PJQ5 311 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 PCSK4Q6UW60 755 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 Q6YL49 198 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 CNTD1Q8N815 330 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.95□□□□□ -1.62
MDM2-227ENST00000540709 OR2I1PQ8NGU4 316 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 NRG4Q8WWG1 115 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 ALOXE3Q9BYJ1 711 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 SPC25Q9HBM1 224 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 KLHL11Q9NVR0 708 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 MKS1Q9NXB0 559 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 SIK3Q9Y2K2 1263 aa4.95□□□□□ -1.62
MDM2-227ENST00000540709 MTO1Q9Y2Z2 717 aaKnown RBP4.95□□□□□ -1.62
MDM2-227ENST00000540709 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 TCRBV7S2A1N4TA0A589 114 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 FAM171A2A8MVW0 826 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 XPOTO43592 962 aaKnown RBP4.94□□□□□ -1.62
MDM2-227ENST00000540709 GPR32O75388 356 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 CDKL5O76039 1030 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 HKR1P10072 659 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 AGXTP21549 392 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 PCSK1P29120 753 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 AVPR1BP47901 424 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 ERVK-21P61565 698 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 RHOT2Q8IXI1 618 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 SLC44A3Q8N4M1 653 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.94□□□□□ -1.62
MDM2-227ENST00000540709 ASB10Q8WXI3 467 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 FUBP3Q96I24 572 aaKnown RBP eCLIP4.94□□□□□ -1.62
MDM2-227ENST00000540709 ADAM2Q99965 735 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 GSTO2Q9H4Y5 243 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 MANSC1Q9H8J5 431 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 FBXO34Q9NWN3 711 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 USP25Q9UHP3 1055 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 PCDHA13Q9Y5I0 950 aa4.94□□□□□ -1.62
MDM2-227ENST00000540709 MYBBP1AQ9BQG0 1328 aaKnown RBP4.94□□□□□ -1.62
MDM2-227ENST00000540709 PHLDB1Q86UU1 1377 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 COL4A3Q01955 1670 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 KIAA0355O15063 1070 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 PRSS23O95084 383 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 GPANK1O95872 356 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 FOSP01100 380 aaPredicted RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 MYBL2P10244 700 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 POU3F3P20264 500 aaPredicted RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 DDCP20711 480 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 FGFR4P22455 802 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 GUCY1A2P33402 732 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 IARSP41252 1262 aaKnown RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 SLC6A9P48067 706 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 ITKQ08881 620 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 MGAT2Q10469 447 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 FAM50AQ14320 339 aaKnown RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 RNF187Q5TA31 235 aaPredicted RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 OLFML1Q6UWY5 402 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 RSPH3Q86UC2 560 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 TMEM132CQ8N3T6 1108 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 ZGPATQ8N5A5 531 aaKnown RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 TBC1D15Q8TC07 691 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 HOXB13Q92826 284 aaPredicted RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 CYFIP2Q96F07 1278 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 MARS2Q96GW9 593 aaKnown RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 RNPEPQ9H4A4 650 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 SLC23A1Q9UHI7 598 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 SAP30BPQ9UHR5 308 aaKnown RBP4.93□□□□□ -1.62
MDM2-227ENST00000540709 ATP8A1Q9Y2Q0 1164 aa4.93□□□□□ -1.62
MDM2-227ENST00000540709 PIPSLA2A3N6 862 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 TEX33O43247 280 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 IGSF3O75054 1194 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 LMNAP02545 664 aaKnown RBP4.92□□□□□ -1.62
MDM2-227ENST00000540709 AMY1AP04745 511 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 CFIP05156 583 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 ELANEP08246 267 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 TAP1Q03518 808 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 COL10A1Q03692 680 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 STRIP1Q5VSL9 837 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.92□□□□□ -1.62
MDM2-227ENST00000540709 TMX3Q96JJ7 454 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 PUS7LQ9H0K6 701 aaKnown RBP4.92□□□□□ -1.62
MDM2-227ENST00000540709 TOR3AQ9H497 397 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 RSAD1Q9HA92 442 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 CASS4Q9NQ75 786 aa4.92□□□□□ -1.62
MDM2-227ENST00000540709 CCDC78A2IDD5 438 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 CDHR4A6H8M9 788 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 CKBP12277 381 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 ALAS1P13196 640 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 CXCR5P32302 372 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 GUCY2FP51841 1108 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 OCA2Q04671 838 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 ABCB5Q2M3G0 1257 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 ABHD17BQ5VST6 288 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 B3GNTL1Q67FW5 361 aaPredicted RBP4.91□□□□□ -1.62
MDM2-227ENST00000540709 OTUD7BQ6GQQ9 843 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 DPY19L2P1Q6NXN4 242 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 FITM2Q8N6M3 262 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 CASKIN2Q8WXE0 1202 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 MTMR8Q96EF0 704 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 Q96MF0 132 aa4.91□□□□□ -1.62
MDM2-227ENST00000540709 CCDC8Q9H0W5 538 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms