RNA–Protein interactions for RNA: ENST00000540501.1

STIP1-208, Transcript of stress induced phosphoprotein 1, human

TSL 3

Gene STIP1, Length 880 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STIP1-208	ENST00000540501	DLAT	P10515	647 aa	Known RBP	27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	CYP3A5	P20815	502 aa		27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	DUOXA2	Q1HG44	320 aa		27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	RNF214	Q8ND24	703 aa		27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	HELQ	Q8TDG4	1101 aa		27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	KIF12	Q96FN5	646 aa		27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	LIMA1	Q9UHB6	759 aa	Known RBP	27.83	■■■□□ 2.05
STIP1-208	ENST00000540501	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	27.83	■■■□□ 2.04
STIP1-208	ENST00000540501	TNNC2	P02585	160 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	TMEM191B	P0C7N4	346 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	CLLU1OS	Q5K130	101 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	BEST2	Q8NFU1	509 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	RNPC3	Q96LT9	517 aa	Known RBP	27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	TUBGCP2	Q9BSJ2	902 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	HSD3B7	Q9H2F3	369 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	RNF19A	Q9NV58	838 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	INTS13	Q9NVM9	706 aa		27.82	■■■□□ 2.04
STIP1-208	ENST00000540501	LRRC10B	A6NIK2	292 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	LRRIQ3	A6PVS8	624 aa	Predicted RBP	27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	GJB5	O95377	273 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	FGFR1	P11362	822 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	ATP2A2	P16615	1042 aa	Known RBP	27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	UVSSA	Q2YD98	709 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	DCAF17	Q5H9S7	520 aa	Predicted RBP	27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	JADE1	Q6IE81	842 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	GAS2L3	Q86XJ1	694 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	SLC35C1	Q96A29	364 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	ZFP42	Q96MM3	310 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	CASD1	Q96PB1	797 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	CXXC1	Q9P0U4	656 aa	Predicted RBP	27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	INPP5F	Q9Y2H2	1132 aa		27.81	■■■□□ 2.04
STIP1-208	ENST00000540501	TULP1	O00294	542 aa	Predicted RBP	27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	P4HA2	O15460	535 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	SCNN1G	P51170	649 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	CETN1	Q12798	172 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	ZBTB6	Q15916	424 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	FILIP1L	Q4L180	1135 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	CMTR2	Q8IYT2	770 aa	Known RBP	27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	LRRC43	Q8N309	656 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	GSTCD	Q8NEC7	633 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	ZNF689	Q96CS4	500 aa	Predicted RBP	27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	FAM193B	Q96PV7	902 aa	Predicted RBP	27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	PPP1R10	Q96QC0	940 aa	Known RBP	27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	ZBED2	Q9BTP6	218 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	R3HCC1	Q9Y3T6	440 aa	Known RBP	27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	INSL6	Q9Y581	213 aa		27.8	■■■□□ 2.04
STIP1-208	ENST00000540501	PTPRS	Q13332	1948 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	TBKBP1	A7MCY6	615 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	PTGES	O14684	152 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	PMM2	O15305	246 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	MEFV	O15553	781 aa	Predicted RBP	27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	AFP	P02771	609 aa	Known RBP	27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	TFAM	Q00059	246 aa	Known RBP	27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	RNASEL	Q05823	741 aa	Known RBP	27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	KRT31	Q15323	416 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	SHH	Q15465	462 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	HSP90AA4P	Q58FG1	418 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	HERC6	Q8IVU3	1022 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	PLEKHO2	Q8TD55	490 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	UROC1	Q96N76	676 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	YME1L1	Q96TA2	773 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	RBSN	Q9H1K0	784 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	TMEM8A	Q9HCN3	771 aa		27.79	■■■□□ 2.04
STIP1-208	ENST00000540501	HTRA4	P83105	476 aa	Predicted RBP	27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	KCNH2	Q12809	1159 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	HABP4	Q5JVS0	413 aa	Known RBP	27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	C9orf50	Q5SZB4	431 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	KRT39	Q6A163	491 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	EFCAB13	Q8IY85	973 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	ZMAT2	Q96NC0	199 aa	Known RBP	27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	RAD9A	Q99638	391 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	TBC1D13	Q9NVG8	400 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	MIOS	Q9NXC5	875 aa		27.78	■■■□□ 2.04
STIP1-208	ENST00000540501	POMC	P01189	267 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	NFIC	P08651	508 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	RPL9	P32969	192 aa	Known RBP	27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	DLG4	P78352	724 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	TUSC3	Q13454	348 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	VWA3B	Q502W6	1294 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	GLRA4	Q5JXX5	417 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	DDX27	Q96GQ7	796 aa	Known RBP	27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	POP1	Q99575	1024 aa	Known RBP	27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	NDST4	Q9H3R1	872 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	RC3H2	Q9HBD1	1191 aa	Known RBP	27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	ITGA11	Q9UKX5	1188 aa		27.77	■■■□□ 2.04
STIP1-208	ENST00000540501	SERPINC1	P01008	464 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	TRIM49	P0CI25	452 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	TRIM49C	P0CI26	452 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	PAX3	P23760	479 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	MXI1	P50539	228 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	COPB1	P53618	953 aa	Known RBP	27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	WNT7B	P56706	349 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	C1orf220	Q5T0J3	134 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	FAM117B	Q6P1L5	589 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	DPP3	Q9NY33	737 aa		27.76	■■■□□ 2.03
STIP1-208	ENST00000540501	RBAK-RBAKDN	I3L0D1	243 aa		27.75	■■■□□ 2.03
STIP1-208	ENST00000540501	PHACTR2	O75167	634 aa		27.75	■■■□□ 2.03
STIP1-208	ENST00000540501	C4BPA	P04003	597 aa	Known RBP	27.75	■■■□□ 2.03
STIP1-208	ENST00000540501	TPM3	P06753	285 aa		27.75	■■■□□ 2.03
STIP1-208	ENST00000540501	ATP1A3	P13637	1013 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms