RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 SNX27Q96L92 541 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 ZMAT2Q96NC0 199 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 ACAP3Q96P50 834 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 SMOC2Q9H3U7 446 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 KCNK12Q9HB15 430 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 BLOC1S4Q9NUP1 217 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 ODF2LQ9ULJ1 636 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 CLUHO75153 1309 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 ANK1P16157 1881 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 ADAM12O43184 909 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 B3GAT3O94766 335 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 HNRNPA1P09651 372 aaKnown RBP eCLIP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 RPL9P32969 192 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 LONP1P36776 959 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 ZNF131P52739 623 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 YARSP54577 528 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 MCL1Q07820 350 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 TDGQ13569 410 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 UVSSAQ2YD98 709 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 GLRA4Q5JXX5 417 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 ZBTB33Q86T24 672 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 C3orf58Q8NDZ4 430 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 HASPINQ8TF76 798 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 SMG7Q92540 1137 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 ZBTB45Q96K62 511 aaPredicted RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 SLC38A7Q9NVC3 462 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 DUSP12Q9UNI6 340 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
SEMA4D-223ENST00000540475 H0YCG3 227 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 TRAPPC3O43617 180 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 TBC1D4O60343 1298 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 PDGFBP01127 241 aaPredicted RBP14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 ADRB2P07550 413 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 UBA7P41226 1012 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 GRIN1Q05586 938 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 TCF15Q12870 199 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 STRN3Q13033 797 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 MRPL58Q14197 206 aaKnown RBP14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 SLC10A6Q3KNW5 377 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 RSPO2Q6UXX9 243 aaPredicted RBP14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 CDK5RAP3Q96JB5 506 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 MYADMQ96S97 322 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 HAPLN2Q9GZV7 340 aa14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 ZFP37Q9Y6Q3 630 aaPredicted RBP14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
SEMA4D-223ENST00000540475 NPHP3-ACAD11A0A0J9YXS1 232 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 ANHXE9PGG2 379 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 PIGRP01833 764 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 PDCP20941 246 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 CLCN5P51795 746 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 PTPN5P54829 565 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 NOLC1Q14978 699 aaKnown RBP eCLIP14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 PTPAQ15257 358 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 ZRSR1Q15695 479 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 ZBTB6Q15916 424 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 SLC8B1Q6J4K2 584 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 GLYCTKQ8IVS8 523 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 CALML4Q96GE6 196 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 INTS4Q96HW7 963 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 FIZ1Q96SL8 496 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 PLIN2Q99541 437 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 REEP2Q9BRK0 252 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 TCHPQ9BT92 498 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 PLEKHA5Q9HAU0 1116 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 CACNA1HO95180 2353 aa14.34□□□□□ -0.11
SEMA4D-223ENST00000540475 MYH15Q9Y2K3 1946 aa14.33□□□□□ -0.11
SEMA4D-223ENST00000540475 SYN3O14994 580 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 CLDN3O15551 220 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 FAM189A1O60320 539 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 ABLIM3O94929 683 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 LAMP2P13473 410 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 OR1D2P34982 312 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 OSTNP61366 133 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 HAUS6Q7Z4H7 955 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 RAD54LQ92698 747 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 BACH2Q9BYV9 841 aa14.33□□□□□ -0.12
SEMA4D-223ENST00000540475 TTC26A0AVF1 554 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 PODXLO00592 558 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 C8AP07357 584 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 CLTAP09496 248 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 MYBP10242 640 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 NPR3P17342 541 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 PLCG1P19174 1290 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 TKTP29401 623 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 ABCD1P33897 745 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms