RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 KBTBD4Q9NVX7 518 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 SNTG2Q9NY99 539 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 TBC1D7Q9P0N9 293 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 NCDNQ9UBB6 729 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 STK17AQ9UEE5 414 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 PUF60Q9UHX1 559 aaKnown RBP12.52□□□□□ -0.41
TMEM258-205ENST00000540434 CA14Q9ULX7 337 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
TMEM258-205ENST00000540434 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.41
TMEM258-205ENST00000540434 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 ANKRD11Q6UB99 2663 aaPredicted RBP12.51□□□□□ -0.41
TMEM258-205ENST00000540434 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 CLASP2O75122 1294 aaKnown RBP12.51□□□□□ -0.41
TMEM258-205ENST00000540434 LAG3P18627 525 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 PROZP22891 400 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 CASP5P51878 434 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 EFNA5P52803 228 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 DMP1Q13316 513 aaPredicted RBP12.51□□□□□ -0.41
TMEM258-205ENST00000540434 TDGQ13569 410 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 NOMO2Q5JPE7 1267 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 VARS2Q5ST30 1063 aaKnown RBP12.51□□□□□ -0.41
TMEM258-205ENST00000540434 ATF7IP2Q5U623 682 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 KIAA1841Q6NSI8 718 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 RSAD2Q8WXG1 361 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 RABGGTAQ92696 567 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 SPATA32Q96LK8 384 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 PRIMPOLQ96LW4 560 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 ZHX3Q9H4I2 956 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 CDV3Q9UKY7 258 aaKnown RBP12.51□□□□□ -0.41
TMEM258-205ENST00000540434 ODF2LQ9ULJ1 636 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 DUSP12Q9UNI6 340 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
TMEM258-205ENST00000540434 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-205ENST00000540434 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 C2orf71A6NGG8 1288 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 ANKRD63C9JTQ0 380 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
TMEM258-205ENST00000540434 TRAK2O60296 914 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 LRRN2O75325 713 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 FAM13AO94988 1023 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
TMEM258-205ENST00000540434 ITGA4P13612 1032 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 PFKFB1P16118 471 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 CMA1P23946 247 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 MLH1P40692 756 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 RAB27AP51159 221 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 SCNN1GP51170 649 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 KRT85P78386 507 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 PCBP1Q15365 356 aaKnown RBP eCLIP12.5□□□□□ -0.41
TMEM258-205ENST00000540434 PPM1JQ5JR12 505 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 ZBTB41Q5SVQ8 909 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 KCNT2Q6UVM3 1135 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-205ENST00000540434 TMC7Q7Z402 723 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 MAML2Q8IZL2 1156 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-205ENST00000540434 ZSWIM2Q8NEG5 633 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 CCDC51Q96ER9 411 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 VN1R3Q9BXE9 311 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 GBP3Q9H0R5 595 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 CDT1Q9H211 546 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 BLZF1Q9H2G9 400 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 TNFSF13BQ9Y275 285 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
TMEM258-205ENST00000540434 FRYQ5TBA9 3013 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
TMEM258-205ENST00000540434 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 PTGESO14684 152 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 N4BP3O15049 544 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 INPPL1O15357 1258 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 PPP1R37O75864 691 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 GALTP07902 379 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 MYBP10242 640 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 GLULP15104 373 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 CA8P35219 290 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 HOXD13P35453 343 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 TXLNAP40222 546 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 SLC11A1P49279 550 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 NDUFA8P51970 172 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 BCAR1P56945 870 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 OSTNP61366 133 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 GTF2BQ00403 316 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 CUL4BQ13620 913 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 NAB2Q15742 525 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 ATAT1Q5SQI0 421 aa12.49□□□□□ -0.41
TMEM258-205ENST00000540434 ZC3H14Q6PJT7 736 aaKnown RBP12.49□□□□□ -0.41
TMEM258-205ENST00000540434 GLB1LQ6UWU2 654 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms