RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 BANF1O75531 89 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 CHKAP35790 457 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 GALCP54803 685 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 RARS2Q5T160 578 aaKnown RBP11.71□□□□□ -0.54
PBX1-212ENST00000540236 FAM182AQ5T1J6 154 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 TMEM63BQ5T3F8 832 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 V9GYQ6 96 aa11.71□□□□□ -0.54
PBX1-212ENST00000540236 ATP7BP35670 1465 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 NOTOA8MTQ0 251 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 AQP4P55087 323 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 SLC25A3Q00325 362 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 C6orf52Q5T4I8 152 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CEP44Q9C0F1 390 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 MYOM1P52179 1685 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 G3V3G9 751 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 STRNO43815 780 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 AUHQ13825 339 aaKnown RBP11.7□□□□□ -0.54
PBX1-212ENST00000540236 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
PBX1-212ENST00000540236 DCAF8Q5TAQ9 597 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 EGFLAMQ63HQ2 1017 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 PRR23BQ6ZRT6 265 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 MED15Q96RN5 788 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 BBS2Q9BXC9 721 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CCDC166P0CW27 439 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 MAPK4P31152 587 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 ARPC4P59998 168 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 PICALMQ13492 652 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 MYBPC2Q14324 1141 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 OR6Y1Q8NGX8 325 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 PYROXD1Q8WU10 500 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 EME1Q96AY2 570 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CITED4Q96RK1 184 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 ADNPQ9H2P0 1102 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 TOR3AQ9H497 397 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 ZNF212Q9UDV6 495 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
PBX1-212ENST00000540236 IQCA1LA6NCM1 817 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CDH3P22223 829 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CCDC103Q8IW40 242 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 CORO1BQ9BR76 489 aa11.7□□□□□ -0.54
PBX1-212ENST00000540236 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
PBX1-212ENST00000540236 GOLGA8QA0A0J9YX86 632 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 STT3AP46977 705 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 PDAP1Q13442 181 aaKnown RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 MTFR1Q15390 333 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 UBAP2Q5T6F2 1119 aaKnown RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 CCDC138Q96M89 665 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 NEDD8Q15843 81 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 FAM26FQ5R3K3 315 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 PIGWQ7Z7B1 504 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 RXRGP48443 463 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 BFSP1Q12934 665 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 GPS1Q13098 491 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 SIX6OS1Q8N1H7 587 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 PPM1KQ8N3J5 372 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 ACSF2Q96CM8 615 aaPredicted RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 AURKCQ9UQB9 309 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 COPEO14579 308 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 NR4A1P22736 598 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 PBX1P40424 430 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 CDK7P50613 346 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 USP11P51784 963 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 DYNLL1P63167 89 aaKnown RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 RASGRF1Q13972 1273 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
PBX1-212ENST00000540236 PTAR1Q7Z6K3 402 aaPredicted RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 COPS7BQ9H9Q2 264 aaPredicted RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 DDX3XO00571 662 aaKnown RBP eCLIP11.69□□□□□ -0.54
PBX1-212ENST00000540236 DAB1O75553 588 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 OXSR1O95747 527 aaPredicted RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 ENO3P13929 434 aaPredicted RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 IFNAR1P17181 557 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 CD58P19256 250 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 PKN2Q16513 984 aaKnown RBP11.69□□□□□ -0.54
PBX1-212ENST00000540236 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
PBX1-212ENST00000540236 FAM237BA0A1B0GVD1 139 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SEMA3DO95025 777 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 KRT8P05787 483 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 KCNA2P16389 499 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 RGS2P41220 211 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 PHKA1P46020 1223 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SLC30A5Q8TAD4 765 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 MAK16Q9BXY0 300 aaKnown RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 TXNDC16Q9P2K2 825 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms