RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 LGALS16A8MUM7 142 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TEX33O43247 280 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 AFPP02771 609 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TPM2P07951 284 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 PFKMP08237 780 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TNNI1P19237 187 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 GCLMP48507 274 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 NR1I3Q14994 352 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 SURF1Q15526 300 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 FILIP1LQ4L180 1135 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 JADE1Q6IE81 842 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 EFCAB13Q8IY85 973 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 PGBD4Q96DM1 585 aa20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CXXC1Q9P0U4 656 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1A-213ENST00000540022 EOMESO95936 686 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 FGBP02675 491 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 NFICP08651 508 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CBWD6Q4V339 395 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 XKR4Q5GH76 650 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CBWD3Q5JTY5 395 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CBWD5Q5RIA9 395 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 WDR49Q8IV35 697 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CD302Q8IX05 232 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 DEFB123Q8N688 67 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 OR5B17Q8NGF7 314 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ZFP42Q96MM3 310 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ZMAT2Q96NC0 199 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 RSAD1Q9HA92 442 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TMEM161AQ9NX61 479 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CNTN3Q9P232 1028 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 GIT1Q9Y2X7 761 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ABHD14A-ACY1A0A1B0GW23 586 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 MLH1P40692 756 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 FMO5P49326 533 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 AFF1P51825 1210 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 PTPN21Q16825 1174 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 GLRA4Q5JXX5 417 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 GAD1Q99259 594 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TMEM117Q9H0C3 514 aa20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ELAC1Q9H777 363 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-213ENST00000540022 PTGESO14684 152 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CBFA2T2O43439 604 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 C4BPAP04003 597 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ZNF75DP51815 510 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TFAMQ00059 246 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 UBXN1Q04323 297 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 RASIP1Q5U651 963 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 PSRC1Q6PGN9 363 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 C15orf39Q6ZRI6 1047 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 SV2AQ7L0J3 742 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 GSTCDQ8NEC7 633 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 KIF12Q96FN5 646 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TMEM8AQ9HCN3 771 aa20.47■□□□□ 0.87
TNFRSF1A-213ENST00000540022 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ARL5CA6NH57 179 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 STX10O60499 249 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 KCNE1P15382 129 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 GTF2H1P32780 548 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 MXI1P50539 228 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 SMAD3P84022 425 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 ZBTB6Q15916 424 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 FKBP15Q5T1M5 1219 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TMCO2Q7Z6W1 182 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 TMEM130Q8N3G9 435 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 MTMR12Q9C0I1 747 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 UBN1Q9NPG3 1134 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 MIOSQ9NXC5 875 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 C2CD2Q9Y426 696 aa20.46■□□□□ 0.87
TNFRSF1A-213ENST00000540022 OFD1O75665 1012 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ADCY5O95622 1261 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TMEM191BP0C7N4 346 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 FGFR1P11362 822 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 WDR5P61964 334 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 DEFB103AP81534 67 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TMEM132DQ14C87 1099 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 DUOXA2Q1HG44 320 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ZACNQ401N2 412 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 CLLU1OSQ5K130 101 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 TDRD10Q5VZ19 366 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 KRT39Q6A163 491 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SCARA3Q6AZY7 606 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 FAM109BQ6ICB4 259 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 HERVK_113Q902F9 699 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 MTMR10Q9NXD2 777 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PLAGL2Q9UPG8 496 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 DERAQ9Y315 318 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 PCDHB7Q9Y5E2 793 aa20.45■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ZBBXA8MT70 800 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ACTN1P12814 892 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 SCNN1GP51170 649 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 AP3M2P53677 418 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 MYL7Q01449 175 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 KCNMA1Q12791 1236 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 NT5DC4Q86YG4 428 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 NPAS4Q8IUM7 802 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 HELQQ8TDG4 1101 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 ANKRD36BP1Q96IX9 119 aa20.44■□□□□ 0.86
TNFRSF1A-213ENST00000540022 RPS6KC1Q96S38 1066 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms