RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DNAI1Q9UI46 699 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 A0A0U1RQJ8 604 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 A0A1B0GUA9 196 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 PJA2O43164 708 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 B4GALT4O60513 344 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 HLA-DRAP01903 254 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 RPLP2P05387 115 aaKnown RBP18.19■□□□□ 0.5
COPS3-212ENST00000539941 MAGEA1P43355 309 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 PRMT2P55345 433 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 GFPT1Q06210 699 aaPredicted RBP18.19■□□□□ 0.5
COPS3-212ENST00000539941 BIRC3Q13489 604 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 HIC1Q14526 733 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
COPS3-212ENST00000539941 ARHGAP44Q17R89 818 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 KIZQ2M2Z5 673 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 WDR44Q5JSH3 913 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 CCDC122Q5T0U0 273 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 SMYD5Q6GMV2 418 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 RUFY4Q6ZNE9 571 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
COPS3-212ENST00000539941 PPM1KQ8N3J5 372 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 HELQQ8TDG4 1101 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 ATRIPQ8WXE1 791 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 ADPGKQ9BRR6 497 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 RPF1Q9H9Y2 349 aaKnown RBP18.19■□□□□ 0.5
COPS3-212ENST00000539941 C1orf112Q9NSG2 853 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 PTPN22Q9Y2R2 807 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 PTPRJQ12913 1337 aa18.19■□□□□ 0.5
COPS3-212ENST00000539941 TREHO43280 583 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 PGK1P00558 417 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 DARSP14868 501 aaKnown RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 ELNP15502 786 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 PIK3CAP42336 1068 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 DCAF4L1Q3SXM0 396 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 SEZ6Q53EL9 994 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 KLHDC9Q8NEP7 349 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 SHC3Q92529 594 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.18■□□□□ 0.5
COPS3-212ENST00000539941 GTF2IRD1Q9UHL9 959 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 FOXN3O00409 490 aaPredicted RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 LRRN2O75325 713 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 CSDE1O75534 798 aaKnown RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 CCND3P30281 292 aaPredicted RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 AXLP30530 894 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 CASQ1P31415 396 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 DUOXA2Q1HG44 320 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 LMBRD2Q68DH5 695 aaPredicted RBP18.18■□□□□ 0.5
COPS3-212ENST00000539941 GPIHBP1Q8IV16 184 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 FAM71AQ8IYT1 594 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 RAET1EQ8TD07 263 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 DNAJB3Q8WWF6 145 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 KREMEN1Q96MU8 473 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 ADAMTS1Q9UHI8 967 aa18.18■□□□□ 0.5
COPS3-212ENST00000539941 CENPFP49454 3210 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 A0A087X0T9 212 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 VNN1O95497 513 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 FAM228BP0C875 321 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 MLLT1Q03111 559 aaPredicted RBP18.17■□□□□ 0.5
COPS3-212ENST00000539941 CXCL17Q6UXB2 119 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 SESTD1Q86VW0 696 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
COPS3-212ENST00000539941 OR5B17Q8NGF7 314 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 CPB2Q96IY4 423 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 WDR24Q96S15 920 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 SYT11Q9BT88 431 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 LACRTQ9GZZ8 138 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 GUCA1BQ9UMX6 200 aa18.17■□□□□ 0.5
COPS3-212ENST00000539941 TRIP12Q14669 1992 aaPredicted RBP18.17■□□□□ 0.5
COPS3-212ENST00000539941 ANK1P16157 1881 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 RCCD1A6NED2 376 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 PHACTR2O75167 634 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 STAG3L1P0CL83 205 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 PNMA6AP0CW24 399 aaPredicted RBP18.16■□□□□ 0.5
COPS3-212ENST00000539941 EIF4BP23588 611 aaKnown RBP18.16■□□□□ 0.5
COPS3-212ENST00000539941 NBPF20Q3BBV1 942 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 ZNF569Q5MCW4 686 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 CATSPER4Q7RTX7 472 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 ASB7Q9H672 318 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
COPS3-212ENST00000539941 NENFQ9UMX5 172 aa18.16■□□□□ 0.5
COPS3-212ENST00000539941 TNNC2P02585 160 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 TBXAS1P24557 533 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 CRYBB1P53674 252 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 ZNF200P98182 395 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 TMEM62Q0P6H9 643 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 NCOA4Q13772 614 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 SNX17Q15036 470 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 NAB2Q15742 525 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 TEX35Q5T0J7 233 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 CCSAPQ6IQ19 270 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 NOTUMQ6P988 496 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 CDR2LQ86X02 465 aaPredicted RBP18.15■□□□□ 0.5
COPS3-212ENST00000539941 CEP120Q8N960 986 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 SLAIN1Q8ND83 568 aa18.15■□□□□ 0.5
COPS3-212ENST00000539941 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms