RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 GUCY2CP25092 1073 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 ATP2C1P98194 919 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 NAB2Q15742 525 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 UPP1Q16831 310 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 AXDND1Q5T1B0 1012 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 ARL6IP4Q66PJ3 421 aaKnown RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 CWF19L1Q69YN2 538 aaKnown RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 SPIRE2Q8WWL2 714 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 RSAD2Q8WXG1 361 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 BICD1Q96G01 975 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 SHDQ96IW2 340 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 KIF2CQ99661 725 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 RUSC1Q9BVN2 902 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 TARS2Q9BW92 718 aaKnown RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 LARSQ9P2J5 1176 aaKnown RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 ANKFY1Q9P2R3 1169 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 CA14Q9ULX7 337 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.75■□□□□ 0.27
UBE3B-211ENST00000539843 CDY1Q9Y6F8 540 aa16.75■□□□□ 0.27
UBE3B-211ENST00000539843 PLXNA3P51805 1871 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 PODXLO00592 558 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 SYN3O14994 580 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 CCL16O15467 120 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 SLC26A4O43511 780 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 NARSO43776 548 aaKnown RBP16.74■□□□□ 0.27
UBE3B-211ENST00000539843 BMP15O95972 392 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 LRG1P02750 347 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 EDN1P05305 212 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 PLS3P13797 630 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 SCP2P22307 547 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 RPL9P32969 192 aaKnown RBP16.74■□□□□ 0.27
UBE3B-211ENST00000539843 NOLC1Q14978 699 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBE3B-211ENST00000539843 PABPC1LQ4VXU2 614 aaKnown RBP16.74■□□□□ 0.27
UBE3B-211ENST00000539843 C1orf186Q6ZWK4 172 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 CCDC105Q8IYK2 499 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 CALML4Q96GE6 196 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 SNX27Q96L92 541 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 AK8Q96MA6 479 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 ARHGEF3Q9NR81 526 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 SMC3Q9UQE7 1217 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 NUMBLQ9Y6R0 609 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 MYO10Q9HD67 2058 aa16.74■□□□□ 0.27
UBE3B-211ENST00000539843 C2orf16Q68DN1 1984 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 PROB1E7EW31 1015 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 ANHXE9PGG2 379 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 PRRG1O14668 218 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 SLC16A4O15374 487 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 CLDN3O15551 220 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 TOM1L1O75674 476 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 GJB2P29033 226 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 TKTP29401 623 aaKnown RBP16.73■□□□□ 0.27
UBE3B-211ENST00000539843 CDC25AP30304 524 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 NBL1P41271 181 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 PFKPQ01813 784 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 HTR4Q13639 388 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 KYAT1Q16773 422 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 ELMOD1Q8N336 334 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 DTWD2Q8NBA8 298 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-211ENST00000539843 TBC1D17Q9HA65 648 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 GOLGA2P5Q9HBQ8 144 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 SLC2A4RGQ9NR83 387 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
UBE3B-211ENST00000539843 CACNA1HO95180 2353 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
UBE3B-211ENST00000539843 KCNE1P15382 129 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 MARCKSP29966 332 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-211ENST00000539843 ABCD1P33897 745 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 MCM4P33991 863 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 UBA7P41226 1012 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 RAD51AP2Q09MP3 1159 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 XKR4Q5GH76 650 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 HYIQ5T013 277 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 ZNF280DQ6N043 979 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 ZPBP2Q6X784 338 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 DAW1Q8N136 415 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 CEP120Q8N960 986 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 SYT2Q8N9I0 419 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-211ENST00000539843 APPL2Q8NEU8 664 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 GPR152Q8TDT2 470 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 FGF13Q92913 245 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 NTPCRQ9BSD7 190 aaKnown RBP16.72■□□□□ 0.27
UBE3B-211ENST00000539843 PTPRHQ9HD43 1115 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 CNTN3Q9P232 1028 aa16.72■□□□□ 0.27
UBE3B-211ENST00000539843 MRPS23Q9Y3D9 190 aaKnown RBP16.72■□□□□ 0.27
UBE3B-211ENST00000539843 SFI1A8K8P3 1242 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 KRT18P05783 430 aaKnown RBP16.71■□□□□ 0.27
UBE3B-211ENST00000539843 PLA2G4BP0C869 781 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 NPR3P17342 541 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 PROZP22891 400 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 BRCC3P46736 316 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 ANGPT1Q15389 498 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 VARS2Q5ST30 1063 aaKnown RBP16.71■□□□□ 0.27
UBE3B-211ENST00000539843 PHLDB3Q6NSJ2 640 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 ALKAL1Q6UXT8 129 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms