RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ZNF568Q3ZCX4 644 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 HS1BP3Q53T59 392 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 KRT79Q5XKE5 535 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 ACRBPQ8NEB7 543 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 TTC8Q8TAM2 541 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 DEPDC1BQ8WUY9 529 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 SPACA7Q96KW9 195 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CNTNAP3BQ96NU0 1288 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CASD1Q96PB1 797 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 SEPT5Q99719 369 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 LXNQ9BS40 222 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CNTNAP3Q9BZ76 1288 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 ZBP1Q9H171 429 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 POLR3FQ9H1D9 316 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 OGFRQ9NZT2 677 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 JRKLQ9Y4A0 524 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 PPME1Q9Y570 386 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CDY1Q9Y6F8 540 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 KHNYNO15037 678 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 PPP1R11O60927 126 aaPredicted RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 RETP07949 1114 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 YWHABP31946 246 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 HSPA4P34932 840 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 EPHA7Q15375 998 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 DGKKQ5KSL6 1271 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 PHLDB3Q6NSJ2 640 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 CCDC117Q8IWD4 279 aaPredicted RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 LEMD2Q8NC56 503 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 HDAC7Q8WUI4 952 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 ACDQ96AP0 544 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 NUSAP1Q9BXS6 441 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 C8orf33Q9H7E9 229 aaPredicted RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 ANKFY1Q9P2R3 1169 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 IPPQ9Y573 584 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 PHLPP2Q6ZVD8 1323 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 PROB1E7EW31 1015 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 H0YHG0 523 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 NARSO43776 548 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 MGEA5O60502 916 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 PRKCBP05771 671 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 CCT6AP40227 531 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 SARNPP82979 210 aaKnown RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 TSPY1Q01534 308 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 LAMTOR4Q0VGL1 99 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 DMP1Q13316 513 aaPredicted RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 ARMC3Q5W041 872 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 PRSS55Q6UWB4 352 aaPredicted RBP8.29□□□□□ -1.08
GNE-205ENST00000539815 KSR1Q8IVT5 923 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 SMC5Q8IY18 1101 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 FGF13Q92913 245 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 GTF3C6Q969F1 213 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 NT5C3AQ9H0P0 336 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 TRPC7Q9HCX4 862 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 LTB4R2Q9NPC1 389 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 ALPK3Q96L96 1907 aa8.29□□□□□ -1.08
GNE-205ENST00000539815 COQ9O75208 318 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 CKMP06732 381 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 PSMC3P17980 439 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 PFKFB3Q16875 520 aaPredicted RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 TSSK4Q6SA08 328 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 TSTD1Q8NFU3 115 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 PIGKQ92643 395 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 CPB2Q96IY4 423 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 RNF26Q9BY78 433 aaPredicted RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 DNAJB4Q9UDY4 337 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 HES2Q9Y543 173 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 H0YCG3 227 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 CCNE1P24864 410 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 CNR2P34972 360 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 EFNA5P52803 228 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 MGAT3Q09327 533 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 RSPO2Q6UXX9 243 aaPredicted RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 ACAP3Q96P50 834 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 HEBP1Q9NRV9 189 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 URB1O60287 2271 aaKnown RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 PI15O43692 258 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 ZNF623O75123 536 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 KRT2P35908 639 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 PPM1FP49593 454 aaPredicted RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 ITGB3BPQ13352 177 aaPredicted RBP8.28□□□□□ -1.08
GNE-205ENST00000539815 GLRA4Q5JXX5 417 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 CYP2U1Q7Z449 544 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 SEMA4GQ9NTN9 838 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 GDE1Q9NZC3 331 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 CACNA1IQ9P0X4 2223 aa8.28□□□□□ -1.08
GNE-205ENST00000539815 SLC38A8A6NNN8 435 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 TPM3P06753 285 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 CASQ1P31415 396 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 NTHL1P78549 312 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 ARHGAP29Q52LW3 1261 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 CLLU1OSQ5K130 101 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 TMEM184AQ6ZMB5 413 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 MNS1Q8NEH6 495 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 CMASQ8NFW8 434 aaPredicted RBP8.27□□□□□ -1.08
GNE-205ENST00000539815 MYADMQ96S97 322 aa8.27□□□□□ -1.08
GNE-205ENST00000539815 HERC2P3Q9BVR0 1158 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms