RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PARP2Q9UGN5 583 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 PCDHB2Q9Y5E7 798 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 RECQL4O94761 1208 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 TNNC2P02585 160 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 NFICP08651 508 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 AKAP5P24588 427 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 PIK3CAP42336 1068 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 LRMPQ12912 555 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 DSC3Q14574 896 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 SEMA4DQ92854 862 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 SNX27Q96L92 541 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 PANX2Q96RD6 677 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 IFIH1Q9BYX4 1025 aaKnown RBP17.45■□□□□ 0.38
TRAF3-204ENST00000539721 HIPK3Q9H422 1215 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 PLEKHA5Q9HAU0 1116 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 ABHD10Q9NUJ1 306 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 FHOD1Q9Y613 1164 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 KIAA0100Q14667 2235 aaKnown RBP17.45■□□□□ 0.38
TRAF3-204ENST00000539721 PDCD11Q14690 1871 aaKnown RBP17.45■□□□□ 0.38
TRAF3-204ENST00000539721 MGEA5O60502 916 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 LRRN2O75325 713 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 HLA-DRAP01903 254 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 UCHL3P15374 230 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 TMEM132DQ14C87 1099 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 TRAPPC11Q7Z392 1133 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 OR8K1Q8NGG5 319 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 APEX2Q9UBZ4 518 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRAF3-204ENST00000539721 UMODL1Q5DID0 1318 aa17.45■□□□□ 0.38
TRAF3-204ENST00000539721 NRDCO43847 1150 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 RAB27AP51159 221 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 TSR1Q2NL82 804 aaKnown RBP17.44■□□□□ 0.38
TRAF3-204ENST00000539721 GJB7Q6PEY0 223 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 RRAGAQ7L523 313 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 NT5DC4Q86YG4 428 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 BAP1Q92560 729 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 KIF12Q96FN5 646 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 ADAM2Q99965 735 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 PPP1R12CQ9BZL4 782 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■■ 61.4
TRAF3-204ENST00000539721 FBXL5Q9UKA1 691 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 C2CD2Q9Y426 696 aa17.44■□□□□ 0.38
TRAF3-204ENST00000539721 NBNO60934 754 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 VNN1O95497 513 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 ITGA4P13612 1032 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 IQCEQ6IPM2 695 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 PHLDB3Q6NSJ2 640 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 PDXDC1Q6P996 788 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 CCDC112Q8NEF3 446 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 NT5C1BQ96P26 610 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 DNAJC7Q99615 494 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 TRAIPQ9BWF2 469 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 KLK14Q9P0G3 267 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 DNAJC12Q9UKB3 198 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 DERAQ9Y315 318 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 DAAM1Q9Y4D1 1078 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 LRRC53A6NM62 1247 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 ZC3H11AO75152 810 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAF3-204ENST00000539721 CLSTN1O94985 981 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 CLTBP09497 229 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 RFX1P22670 979 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 TRPC3Q13507 836 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 NCOA4Q13772 614 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 RAPGEF1Q13905 1077 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 WDR44Q5JSH3 913 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 ARHGEF19Q8IW93 802 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 SPAG5Q96R06 1193 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 BAG1Q99933 345 aaPredicted RBP17.43■□□□□ 0.38
TRAF3-204ENST00000539721 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 TMEM39AQ9NV64 488 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 CNTN3Q9P232 1028 aa17.43■□□□□ 0.38
TRAF3-204ENST00000539721 AJAP1Q9UKB5 411 aaPredicted RBP17.43■□□□□ 0.38
TRAF3-204ENST00000539721 SKIP12755 728 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
TRAF3-204ENST00000539721 CCL23P55773 120 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 CCZ1BP86790 482 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 CCZ1P86791 482 aaPredicted RBP17.42■□□□□ 0.38
TRAF3-204ENST00000539721 ALKAL1Q6UXT8 129 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 SCLYQ96I15 445 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 NAA15Q9BXJ9 866 aaKnown RBP17.42■□□□□ 0.38
TRAF3-204ENST00000539721 FTHL17Q9BXU8 183 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 IMPG2Q9BZV3 1241 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 NUCKS1Q9H1E3 243 aaKnown RBP17.42■□□□□ 0.38
TRAF3-204ENST00000539721 CXCL16Q9H2A7 254 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 UBE2TQ9NPD8 197 aaPredicted RBP17.42■□□□□ 0.38
TRAF3-204ENST00000539721 ZNHIT6Q9NWK9 470 aaKnown RBP17.42■□□□□ 0.38
TRAF3-204ENST00000539721 TBX21Q9UL17 535 aa17.42■□□□□ 0.38
TRAF3-204ENST00000539721 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 ZNF623O75123 536 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 KRT19P08727 400 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 SKILP12757 684 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 CYP2C18P33260 490 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 GPNMBQ14956 572 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 GLRA4Q5JXX5 417 aa17.41■□□□□ 0.38
TRAF3-204ENST00000539721 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
TRAF3-204ENST00000539721 PPM1KQ8N3J5 372 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms