RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 C3orf58Q8NDZ4 430 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 ZSWIM2Q8NEG5 633 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 RABGGTAQ92696 567 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 NGRNQ9NPE2 291 aaKnown RBP16.34■□□□□ 0.21
PRPF19-203ENST00000539180 ENTPD7Q9NQZ7 604 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 SLC38A7Q9NVC3 462 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 TUBGCP4Q9UGJ1 667 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
PRPF19-203ENST00000539180 PRUNE2Q8WUY3 3088 aa16.33■□□□□ 0.21
PRPF19-203ENST00000539180 HIDE1A8MVS5 230 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 ACOT2P49753 483 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 PNOCQ13519 176 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 KCNC3Q14003 757 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.2
PRPF19-203ENST00000539180 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 CTC1Q2NKJ3 1217 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 ARMCX5Q6P1M9 558 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 BRSK2Q8IWQ3 736 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 C12orf56Q8IXR9 622 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 ELOA2Q8IYF1 753 aaPredicted RBP16.33■□□□□ 0.2
PRPF19-203ENST00000539180 SYCP3Q8IZU3 236 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 C18orf25Q96B23 403 aaPredicted RBP16.33■□□□□ 0.2
PRPF19-203ENST00000539180 TSPAN18Q96SJ8 248 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 RPF1Q9H9Y2 349 aaKnown RBP16.33■□□□□ 0.2
PRPF19-203ENST00000539180 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
PRPF19-203ENST00000539180 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.33■□□□□ 0.2
PRPF19-203ENST00000539180 C2orf71A6NGG8 1288 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 LACTBL1A8MY62 500 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 KIAA0391O15091 583 aaKnown RBP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 LILRB3O75022 631 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 GLP2RO95838 553 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 NFICP08651 508 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 IGFBP6P24592 240 aaPredicted RBP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 LRPAP1P30533 357 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 CLCNKBP51801 687 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 WNT7BP56706 349 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 UBE2HP62256 183 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 SNRPFP62306 86 aaKnown RBP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 DUSP6Q16828 381 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 CD302Q8IX05 232 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 PPP2R3CQ969Q6 453 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 PABPC5Q96DU9 382 aaKnown RBP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 CCDC34Q96HJ3 373 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 FBXL18Q96ME1 805 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 GPR62Q9BZJ7 368 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 KCTD10Q9H3F6 313 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 CHST7Q9NS84 486 aa16.32■□□□□ 0.2
PRPF19-203ENST00000539180 UBQLN1Q9UMX0 589 aaKnown RBP16.32■□□□□ 0.2
PRPF19-203ENST00000539180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.31■□□□□ 0.2
PRPF19-203ENST00000539180 PODXLO00592 558 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 EXTL3O43909 919 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 TBX10O75333 385 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
PRPF19-203ENST00000539180 CYP3A5P20815 502 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 SPAG1Q07617 926 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 KNOP1Q1ED39 458 aaKnown RBP16.31■□□□□ 0.2
PRPF19-203ENST00000539180 JADE1Q6IE81 842 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 TMC7Q7Z402 723 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 EFCAB13Q8IY85 973 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 TMEM130Q8N3G9 435 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 EFHBQ8N7U6 833 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 MRPL43Q8N983 215 aaKnown RBP16.31■□□□□ 0.2
PRPF19-203ENST00000539180 VN1R2Q8NFZ6 395 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 TMEM174Q8WUU8 243 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 AUTS2Q8WXX7 1259 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 KIF12Q96FN5 646 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 CDCA3Q99618 268 aaPredicted RBP16.31■□□□□ 0.2
PRPF19-203ENST00000539180 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 ASB7Q9H672 318 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
PRPF19-203ENST00000539180 HSPBP1Q9NZL4 362 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 COG5Q9UP83 839 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 DERAQ9Y315 318 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 C2CD2Q9Y426 696 aa16.31■□□□□ 0.2
PRPF19-203ENST00000539180 SCN1AP35498 2009 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.3■□□□□ 0.2
PRPF19-203ENST00000539180 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 LINC01565O15544 149 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 KINO60870 393 aaKnown RBP16.3■□□□□ 0.2
PRPF19-203ENST00000539180 LTBRP36941 435 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 NRIP1P48552 1158 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 GLUD2P49448 558 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 DSG1Q02413 1049 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 TAS1R1Q7RTX1 841 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF19-203ENST00000539180 GPR65Q8IYL9 337 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
PRPF19-203ENST00000539180 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
PRPF19-203ENST00000539180 RBAKQ9NYW8 714 aaPredicted RBP16.3■□□□□ 0.2
PRPF19-203ENST00000539180 CGNQ9P2M7 1197 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms