RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.47■■□□□ 1.67
TMEM260-202ENST00000538838 SMIM28A0A1B0GU29 152 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 PRKCSHP14314 528 aaPredicted RBP25.46■■□□□ 1.67
TMEM260-202ENST00000538838 TNNI1P19237 187 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 MAN2A1Q16706 1144 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 FAM117BQ6P1L5 589 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 USP37Q86T82 979 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 ANKRD20A12PQ8NF67 263 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 MIOSQ9NXC5 875 aa25.46■■□□□ 1.67
TMEM260-202ENST00000538838 KCNE1P15382 129 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 MCCD1P59942 119 aaPredicted RBP25.45■■□□□ 1.67
TMEM260-202ENST00000538838 ENPEPQ07075 957 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 PPP3CAQ08209 521 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 TMEM132DQ14C87 1099 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 APTXQ7Z2E3 356 aaKnown RBP25.45■■□□□ 1.67
TMEM260-202ENST00000538838 WDR49Q8IV35 697 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 TMEM130Q8N3G9 435 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 OR5B17Q8NGF7 314 aa25.45■■□□□ 1.67
TMEM260-202ENST00000538838 PDE4DIPQ5VU43 2346 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 INPPL1O15357 1258 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 CLDN10P78369 228 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 TFAMQ00059 246 aaKnown RBP25.45■■□□□ 1.66
TMEM260-202ENST00000538838 MIIPQ5JXC2 388 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 ABI1Q8IZP0 508 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 ZNF516Q92618 1163 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 GDF15Q99988 308 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 MTMR12Q9C0I1 747 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 VPS16Q9H269 839 aa25.45■■□□□ 1.66
TMEM260-202ENST00000538838 GBF1Q92538 1859 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 HOXA2O43364 376 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 POMCP01189 267 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 GCLMP48507 274 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 COPB1P53618 953 aaKnown RBP25.44■■□□□ 1.66
TMEM260-202ENST00000538838 KCNH2Q12809 1159 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 NOMO2Q5JPE7 1267 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 C18orf25Q96B23 403 aaPredicted RBP25.44■■□□□ 1.66
TMEM260-202ENST00000538838 PPP1R10Q96QC0 940 aaKnown RBP25.44■■□□□ 1.66
TMEM260-202ENST00000538838 MTIF3Q9H2K0 278 aaKnown RBP25.44■■□□□ 1.66
TMEM260-202ENST00000538838 INTS13Q9NVM9 706 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 TUBGCP4Q9UGJ1 667 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 DERAQ9Y315 318 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 C2CD2Q9Y426 696 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 SLC4A7Q9Y6M7 1214 aa25.44■■□□□ 1.66
TMEM260-202ENST00000538838 DGKIO75912 1065 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 TMEM191BP0C7N4 346 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 GUCY2FP51841 1108 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 FANCCQ00597 558 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 RASIP1Q5U651 963 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 URGCPQ8TCY9 931 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 CASD1Q96PB1 797 aa25.43■■□□□ 1.66
TMEM260-202ENST00000538838 UBE2OQ9C0C9 1292 aaKnown RBP25.43■■□□□ 1.66
TMEM260-202ENST00000538838 KIAA1671Q9BY89 1806 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 TBKBP1A7MCY6 615 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 PES1O00541 588 aaKnown RBP25.42■■□□□ 1.66
TMEM260-202ENST00000538838 SERPINC1P01008 464 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 AFPP02771 609 aaKnown RBP25.42■■□□□ 1.66
TMEM260-202ENST00000538838 GRIK3Q13003 919 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 SHHQ15465 462 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 ZBTB6Q15916 424 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 CBWD6Q4V339 395 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 VWA3BQ502W6 1294 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 PAN2Q504Q3 1202 aaKnown RBP25.42■■□□□ 1.66
TMEM260-202ENST00000538838 CBWD3Q5JTY5 395 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 CBWD5Q5RIA9 395 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 SLC9A7Q96T83 725 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 TMEM117Q9H0C3 514 aa25.42■■□□□ 1.66
TMEM260-202ENST00000538838 THP07101 528 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 SOX4Q06945 474 aaPredicted RBP25.41■■□□□ 1.66
TMEM260-202ENST00000538838 NAB2Q15742 525 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 DUOXA2Q1HG44 320 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 NT5DC4Q86YG4 428 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 ANKRD36BP1Q96IX9 119 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 RNPC3Q96LT9 517 aaKnown RBP25.41■■□□□ 1.66
TMEM260-202ENST00000538838 NDST4Q9H3R1 872 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 GOLGA2P5Q9HBQ8 144 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 UBQLN1Q9UMX0 589 aaKnown RBP25.41■■□□□ 1.66
TMEM260-202ENST00000538838 STX10O60499 249 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 TNNC2P02585 160 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 TPM2P07951 284 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 FMO5P49326 533 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 MXI1P50539 228 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 TDRD10Q5VZ19 366 aaKnown RBP25.41■■□□□ 1.66
TMEM260-202ENST00000538838 SV2AQ7L0J3 742 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 RC3H2Q9HBD1 1191 aaKnown RBP25.41■■□□□ 1.66
TMEM260-202ENST00000538838 TMEM8AQ9HCN3 771 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 TBC1D13Q9NVG8 400 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 HCSTQ9UBK5 93 aa25.41■■□□□ 1.66
TMEM260-202ENST00000538838 LRRC10BA6NIK2 292 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 AP5Z1O43299 807 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 ATP2A2P16615 1042 aaKnown RBP25.4■■□□□ 1.66
TMEM260-202ENST00000538838 GTF2H1P32780 548 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 PLCB2Q00722 1185 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 MYL7Q01449 175 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 BIRC3Q13489 604 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 SCARA3Q6AZY7 606 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 C1orf127Q8N9H9 656 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 BEST2Q8NFU1 509 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 CACTINQ8WUQ7 758 aaKnown RBP25.4■■□□□ 1.66
TMEM260-202ENST00000538838 ZNF689Q96CS4 500 aaPredicted RBP25.4■■□□□ 1.66
TMEM260-202ENST00000538838 NAP1L5Q96NT1 182 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms