RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MICAL3Q7RTP6 2002 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 DEFB128Q7Z7B8 93 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 PPFIBP1Q86W92 1011 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 MYLIPQ8WY64 445 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 SEPT8Q92599 483 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 PDLIM2Q96JY6 352 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 SNX27Q96L92 541 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 INTS2Q9H0H0 1204 aaKnown RBP15.3■□□□□ 0.04
CD4-208ENST00000538827 TMEM8AQ9HCN3 771 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 RAPGEFL1Q9UHV5 662 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 PCDHB2Q9Y5E7 798 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 PHACTR2O75167 634 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 TNNC2P02585 160 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 TPM1P09493 284 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 ITGA4P13612 1032 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 FOSL2P15408 326 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 TRIM21P19474 475 aaKnown RBP15.29■□□□□ 0.04
CD4-208ENST00000538827 GTF2H1P32780 548 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 ENPEPQ07075 957 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 DSC3Q14574 896 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 TMEM132DQ14C87 1099 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 KRT39Q6A163 491 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 JADE1Q6IE81 842 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 WDR49Q8IV35 697 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 EFCAB13Q8IY85 973 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 SMG8Q8ND04 991 aaKnown RBP15.29■□□□□ 0.04
CD4-208ENST00000538827 NEK11Q8NG66 645 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 ANKRD36BP1Q96IX9 119 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 PPP1R9BQ96SB3 815 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 MTMR12Q9C0I1 747 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.04
CD4-208ENST00000538827 FAM207AQ9NSI2 230 aaPredicted RBP15.29■□□□□ 0.04
CD4-208ENST00000538827 KLK14Q9P0G3 267 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 SIK3Q9Y2K2 1263 aa15.29■□□□□ 0.04
CD4-208ENST00000538827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.29■□□□□ 0.04
CD4-208ENST00000538827 TET1Q8NFU7 2136 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 TDRD15B5MCY1 1934 aaKnown RBP15.28■□□□□ 0.04
CD4-208ENST00000538827 RAG1P15918 1043 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
CD4-208ENST00000538827 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 TRIM14Q14142 442 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 SLC10A6Q3KNW5 377 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 DBF4BQ8NFT6 615 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 LPPQ93052 612 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 RPS6KC1Q96S38 1066 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
CD4-208ENST00000538827 TMEM265A0A087WTH1 108 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 TTC26A0AVF1 554 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 GTPBP10A4D1E9 387 aaKnown RBP15.27■□□□□ 0.04
CD4-208ENST00000538827 P4HA2O15460 535 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
CD4-208ENST00000538827 PARNO95453 639 aaKnown RBP15.27■□□□□ 0.04
CD4-208ENST00000538827 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 SKIP12755 728 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 ACTN1P12814 892 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 SLC9A1P19634 815 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 AP3M2P53677 418 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 APBA1Q02410 837 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 KCNMA1Q12791 1236 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 LRMPQ12912 555 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 EPC2Q52LR7 807 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 PLEKHG4Q58EX7 1191 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.04
CD4-208ENST00000538827 SV2AQ7L0J3 742 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 CD302Q8IX05 232 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 LINC01599Q8WXQ3 324 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 ZNF516Q92618 1163 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 APBB2Q92870 758 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 FTHL17Q9BXU8 183 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 ASB7Q9H672 318 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 RNF19AQ9NV58 838 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 IMPACTQ9P2X3 320 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 PRKAG2Q9UGJ0 569 aa15.27■□□□□ 0.04
CD4-208ENST00000538827 ARIH1Q9Y4X5 557 aaPredicted RBP15.27■□□□□ 0.04
CD4-208ENST00000538827 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 KRT19P08727 400 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 PON1P27169 355 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 MLH1P40692 756 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 GUCY2FP51841 1108 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 POU5F1Q01860 360 aaKnown RBP15.26■□□□□ 0.03
CD4-208ENST00000538827 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 ZACNQ401N2 412 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 TRIM65Q6PJ69 517 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 CCDC186Q7Z3E2 898 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 ECHDC2Q86YB7 292 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 FBXL13Q8NEE6 735 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 TAS1R2Q8TE23 839 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 CACTINQ8WUQ7 758 aaKnown RBP15.26■□□□□ 0.03
CD4-208ENST00000538827 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
CD4-208ENST00000538827 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms