RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SEC24CP53992 1094 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 PSMD6Q15008 389 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 ZACNQ401N2 412 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 DEPTORQ8TB45 409 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 MTUS1Q9ULD2 1270 aa26.65■■□□□ 1.86
RAB40C-204ENST00000538492 K7ERI5 159 aa26.64■■□□□ 1.86
RAB40C-204ENST00000538492 CLDN3O15551 220 aa26.64■■□□□ 1.86
RAB40C-204ENST00000538492 SCP2P22307 547 aa26.64■■□□□ 1.86
RAB40C-204ENST00000538492 SSTR3P32745 418 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-204ENST00000538492 CRELD2Q6UXH1 353 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-204ENST00000538492 DLK2Q6UY11 383 aa26.64■■□□□ 1.86
RAB40C-204ENST00000538492 PORCNQ9H237 461 aa26.64■■□□□ 1.86
RAB40C-204ENST00000538492 C4BPAP04003 597 aaKnown RBP26.64■■□□□ 1.85
RAB40C-204ENST00000538492 RRM1P23921 792 aa26.64■■□□□ 1.85
RAB40C-204ENST00000538492 SEZ6Q53EL9 994 aa26.64■■□□□ 1.85
RAB40C-204ENST00000538492 MCOLN2Q8IZK6 566 aa26.64■■□□□ 1.85
RAB40C-204ENST00000538492 TARS2Q9BW92 718 aaKnown RBP26.64■■□□□ 1.85
RAB40C-204ENST00000538492 EPN3Q9H201 632 aa26.64■■□□□ 1.85
RAB40C-204ENST00000538492 KIAA1586Q9HCI6 787 aa26.64■■□□□ 1.85
RAB40C-204ENST00000538492 SSC5DA1L4H1 1573 aa26.64■■□□□ 1.85
RAB40C-204ENST00000538492 MYPNQ86TC9 1320 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 SHBGP04278 402 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 COILP38432 576 aaPredicted RBP26.63■■□□□ 1.85
RAB40C-204ENST00000538492 PMS2P54278 862 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 DRG2P55039 364 aaKnown RBP26.63■■□□□ 1.85
RAB40C-204ENST00000538492 CLDN10P78369 228 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 SIX1Q15475 284 aaPredicted RBP26.63■■□□□ 1.85
RAB40C-204ENST00000538492 PTGISQ16647 500 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 SLC7A3Q8WY07 619 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 EPB41L4BQ9H329 900 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 DHX33Q9H6R0 707 aaKnown RBP26.63■■□□□ 1.85
RAB40C-204ENST00000538492 RBAKQ9NYW8 714 aaPredicted RBP26.63■■□□□ 1.85
RAB40C-204ENST00000538492 PCDHB2Q9Y5E7 798 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 PODXLO00592 558 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 VNN1O95497 513 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 TREML2Q5T2D2 321 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 FBXO40Q9UH90 709 aa26.63■■□□□ 1.85
RAB40C-204ENST00000538492 MROH7Q68CQ1 1323 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 EDN1P05305 212 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 HARSP12081 509 aaKnown RBP26.62■■□□□ 1.85
RAB40C-204ENST00000538492 CORO7P57737 925 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 MAGOHP61326 146 aaKnown RBP26.62■■□□□ 1.85
RAB40C-204ENST00000538492 DAB2IPQ5VWQ8 1189 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 ARFGAP2Q8N6H7 521 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 CYFIP2Q96F07 1278 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 CFHP08603 1231 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 TMOD1P28289 359 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 PASD1Q8IV76 773 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 MSTO1Q9BUK6 570 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 RASSF4Q9H2L5 321 aa26.62■■□□□ 1.85
RAB40C-204ENST00000538492 PPANQ9NQ55 473 aaKnown RBP26.62■■□□□ 1.85
RAB40C-204ENST00000538492 POLR2AP24928 1970 aaKnown RBP26.62■■□□□ 1.85
RAB40C-204ENST00000538492 ATG7O95352 703 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 CYP1B1Q16678 543 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 UBAP2Q5T6F2 1119 aaKnown RBP26.61■■□□□ 1.85
RAB40C-204ENST00000538492 C1orf54Q8WWF1 131 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 STYXL1Q9Y6J8 313 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 LTBP3Q9NS15 1303 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 NAMPTP43490 491 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 HIRAP54198 1017 aaPredicted RBP26.61■■□□□ 1.85
RAB40C-204ENST00000538492 ENPEPQ07075 957 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 AGBL2Q5U5Z8 902 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 MTFR1LQ9H019 292 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 FAM107BQ9H098 131 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 PABPC3Q9H361 631 aaKnown RBP26.61■■□□□ 1.85
RAB40C-204ENST00000538492 APOBEC3GQ9HC16 384 aaKnown RBP26.61■■□□□ 1.85
RAB40C-204ENST00000538492 FAM169AQ9Y6X4 670 aa26.61■■□□□ 1.85
RAB40C-204ENST00000538492 NSFP46459 744 aaKnown RBP26.6■■□□□ 1.85
RAB40C-204ENST00000538492 DNERQ8NFT8 737 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 RNF25Q96BH1 459 aaPredicted RBP26.6■■□□□ 1.85
RAB40C-204ENST00000538492 SLC12A6Q9UHW9 1150 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 E7EVH7 732 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 UBA1P22314 1058 aaKnown RBP26.6■■□□□ 1.85
RAB40C-204ENST00000538492 ICAM3P32942 547 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 ABCD1P33897 745 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 ARL2P36404 184 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 ALDH5A1P51649 535 aaPredicted RBP26.6■■□□□ 1.85
RAB40C-204ENST00000538492 SNX1Q13596 522 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 SCARA3Q6AZY7 606 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 TMEM270Q6UE05 265 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 CNKSR2Q8WXI2 1034 aa26.6■■□□□ 1.85
RAB40C-204ENST00000538492 PPP2R2AP63151 447 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 FAM81BQ96LP2 452 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 SEMA4AQ9H3S1 761 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 GPRC5DQ9NZD1 345 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 KCNG1Q9UIX4 513 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 CAND2O75155 1236 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 ACO1P21399 889 aaKnown RBP26.59■■□□□ 1.85
RAB40C-204ENST00000538492 DENND2CQ68D51 928 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 EEPD1Q7L9B9 569 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 EFCAB13Q8IY85 973 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 CHST13Q8NET6 341 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 OR5B17Q8NGF7 314 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.59■■□□□ 1.85
RAB40C-204ENST00000538492 UHMK1Q8TAS1 419 aaKnown RBP26.59■■□□□ 1.85
RAB40C-204ENST00000538492 BTBD7Q9P203 1132 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 PCDHB4Q9Y5E5 795 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 UMODL1Q5DID0 1318 aa26.59■■□□□ 1.85
RAB40C-204ENST00000538492 EIF3BP55884 814 aaKnown RBP26.58■■□□□ 1.85
RAB40C-204ENST00000538492 DRP2Q13474 957 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms