RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 MAP7Q14244 749 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 TRIP4Q15650 581 aaPredicted RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 NPY5RQ15761 445 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 PFKFB3Q16875 520 aaPredicted RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 LRRC24Q50LG9 513 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 TDRD12Q587J7 1177 aaKnown RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 FAM133BQ5BKY9 247 aaKnown RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 FAM83BQ5T0W9 1011 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 ACBD5Q5T8D3 534 aaPredicted RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 TTC39BQ5VTQ0 682 aaPredicted RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 DAB2IPQ5VWQ8 1189 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 TMTC3Q6ZXV5 915 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 ZNF365Q70YC5 407 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 INTS8Q75QN2 995 aaKnown RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 CD163Q86VB7 1156 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 KLHL7Q8IXQ5 586 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 KIRREL3Q8IZU9 778 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 TTC5Q8N0Z6 440 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP28-207ENST00000538475 HES6Q96HZ4 224 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 ZNF333Q96JL9 665 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 GBP5Q96PP8 586 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 SELENOSQ9BQE4 189 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 CENPKQ9BS16 269 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 PPCSQ9HAB8 311 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 UBN1Q9NPG3 1134 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 LMCD1Q9NZU5 365 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 ZNF212Q9UDV6 495 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 PCYOX1Q9UHG3 505 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 LRP5O75197 1615 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 MYH14Q7Z406 1995 aaKnown RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 ZNF532Q9HCE3 1301 aa7.18□□□□□ -1.26
USP28-207ENST00000538475 TRPM3Q9HCF6 1732 aaPredicted RBP7.18□□□□□ -1.26
USP28-207ENST00000538475 NUP98P52948 1817 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 LOC102724428A0A0B4J2F2 783 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SMIM31A0A1B0GVY4 71 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 GSG1L2A8MUP6 293 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 A8MXQ7 604 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 MIF4GDA9UHW6 222 aaKnown RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 J3QW42 95 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 BUB1O43683 1085 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 TMCC1O94876 653 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 PCCAP05165 728 aaPredicted RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 H2AFZP0C0S5 128 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 MYL6BP14649 208 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 IBSPP21815 317 aaPredicted RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 CHRNA4P43681 627 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 PSMD7P51665 324 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SIK1P57059 783 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 FKBP3Q00688 224 aaKnown RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 GFPT1Q06210 699 aaPredicted RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 KLRC3Q07444 240 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 KLHL30Q0D2K2 578 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 TCIRG1Q13488 830 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SNX1Q13596 522 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 ASIC2Q16515 512 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 MUM1Q2TAK8 710 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 KIAA1755Q5JYT7 1200 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 CCDC174Q6PII3 467 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SYDE1Q6ZW31 735 aaPredicted RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 H2AFVQ71UI9 128 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 PEX26Q7Z412 305 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 ATCAYQ86WG3 371 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 DMRTC2Q8IXT2 367 aaPredicted RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 ZC3H3Q8IXZ2 948 aaKnown RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 BLIDQ8IZY5 108 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 ARHGAP24Q8N264 748 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 METTL13Q8N6R0 699 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 DYDC1Q8WWB3 177 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 GATA6Q92908 595 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 CALML4Q96GE6 196 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 NUDCD1Q96RS6 583 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SMC6Q96SB8 1091 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 PRMT1Q99873 361 aaKnown RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SYT15Q9BQS2 421 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 ISCA1Q9BUE6 129 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 FOXP3Q9BZS1 431 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 IQCGQ9H095 443 aaKnown RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 SMG9Q9H0W8 520 aaKnown RBP7.17□□□□□ -1.26
USP28-207ENST00000538475 DPH5Q9H2P9 285 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 EPB41L4BQ9H329 900 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 LGALS13Q9UHV8 139 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 AMFRQ9UKV5 643 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 NENFQ9UMX5 172 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 PCDHA4Q9UN74 947 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 NCANO14594 1321 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 RIC1Q4ADV7 1423 aa7.17□□□□□ -1.26
USP28-207ENST00000538475 SLX4Q8IY92 1834 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 KIAA0391O15091 583 aaKnown RBP7.16□□□□□ -1.26
USP28-207ENST00000538475 BIRC5O15392 142 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 TJP3O95049 919 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 FTCDO95954 541 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PROCP04070 461 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 MARK3P27448 753 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 PTPN4P29074 926 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 MAN1A1P33908 653 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 SOX18P35713 384 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 MCAMP43121 646 aa7.16□□□□□ -1.26
USP28-207ENST00000538475 RANBP1P43487 201 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms