RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 PPFIA1Q13136 1202 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 GRM4Q14833 912 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 UTP14CQ5TAP6 766 aaKnown RBP6.09□□□□□ -1.43
SNHG1-207ENST00000537965 CATIPQ7Z7H3 387 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 RALYLQ86SE5 291 aaKnown RBP6.09□□□□□ -1.43
SNHG1-207ENST00000537965 TMTC2Q8N394 836 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 NME8Q8N427 588 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 EFHBQ8N7U6 833 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 IL31RAQ8NI17 732 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 LMBR1Q8WVP7 490 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 RUFY2Q8WXA3 655 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 GLG1Q92896 1179 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 GPRASP2Q96D09 838 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 RRP36Q96EU6 259 aaKnown RBP6.09□□□□□ -1.43
SNHG1-207ENST00000537965 PIGSQ96S52 555 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 MAP3K14Q99558 947 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 CDCA3Q99618 268 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-207ENST00000537965 LZTS2Q9BRK4 669 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 LNPKQ9C0E8 428 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 SEC63Q9UGP8 760 aaKnown RBP6.09□□□□□ -1.43
SNHG1-207ENST00000537965 MUTYHQ9UIF7 546 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 TUBE1Q9UJT0 475 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 PLAGL2Q9UPG8 496 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 PCDHB12Q9Y5F1 795 aa6.09□□□□□ -1.43
SNHG1-207ENST00000537965 MTCL1Q9Y4B5 1905 aaKnown RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 MBLAC1A4D2B0 266 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 LOC730098B7Z3J9 87 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 PPP1R11O60927 126 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 PRNPP04156 253 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 ATF7P17544 494 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 GP2P55259 537 aaKnown RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 MRPS6P82932 125 aaKnown RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 DAB2P98082 770 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 ZXDAP98168 799 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 MGAT3Q09327 533 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 CDK5R2Q13319 367 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 LPIN1Q14693 890 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 WTAPQ15007 396 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 CLUL1Q15846 466 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 CYP27C1Q4G0S4 372 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 FBXO47Q5MNV8 452 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 SPOUT1Q5T280 376 aaKnown RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 TEX2Q8IWB9 1127 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 SMRP1Q8NCR6 262 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 NCOA7Q8NI08 942 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 CTCFLQ8NI51 663 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 SPPL3Q8TCT6 385 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 MICAL1Q8TDZ2 1067 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 DNAJB3Q8WWF6 145 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 ISL2Q96A47 359 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 MSLNLQ96KJ4 702 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 PSMG3-AS1Q96PY0 264 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 PHF7Q9BWX1 381 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 GZF1Q9H116 711 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 AZI2Q9H6S1 392 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 TLE6Q9H808 572 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 ALG13Q9NP73 1137 aaKnown RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 PARP2Q9UGN5 583 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 CDY2AQ9Y6F7 541 aa6.08□□□□□ -1.44
SNHG1-207ENST00000537965 ZFHX2Q9C0A1 2572 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-207ENST00000537965 KDM3AQ9Y4C1 1321 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 TBX10O75333 385 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 ITGB1P05556 798 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 LINC00271P0C7V0 271 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SCG2P13521 617 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 HOXB8P17481 243 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 NTF4P34130 210 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SLC26A2P50443 739 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 RRP1P56182 461 aaKnown RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SP4Q02446 784 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 DLX2Q07687 328 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SIGLEC14Q08ET2 396 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PAK2Q13177 524 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 MTMR1Q13613 665 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 CBX2Q14781 532 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PPM1JQ5JR12 505 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 CYB5R4Q7L1T6 521 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 CHD1LQ86WJ1 897 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SMC5Q8IY18 1101 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 POF1BQ8WVV4 589 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SNX27Q96L92 541 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 NEK1Q96PY6 1258 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SDF4Q9BRK5 362 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 MTA3Q9BTC8 594 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SPZ1Q9BXG8 430 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PSTPIP2Q9H939 334 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 RC3H2Q9HBD1 1191 aaKnown RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 SSU72Q9NP77 194 aaKnown RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 C1orf112Q9NSG2 853 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PUF60Q9UHX1 559 aaKnown RBP6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PCDHA4Q9UN74 947 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PCDHB7Q9Y5E2 793 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 PCDHA2Q9Y5H9 948 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 TRPV2Q9Y5S1 764 aa6.07□□□□□ -1.44
SNHG1-207ENST00000537965 IGSF9BQ9UPX0 1349 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 SMIM35A0A1B0GVV1 85 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 GSTTP1A0A1W2PQM5 241 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 MEIS2O14770 477 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms