RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 CBX3Q13185 183 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 MOGSQ13724 837 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF568Q3ZCX4 644 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 DAB2IPQ5VWQ8 1189 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 RFWD3Q6PCD5 774 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 PPP1R21Q6ZMI0 780 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 MARK2Q7KZI7 788 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 HS2ST1Q7LGA3 356 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 NAT14Q8WUY8 206 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 CCDC97Q96F63 343 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 GANQ9H2C0 597 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
SEMA4D-221ENST00000537934 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 USP17L5A8MUK1 530 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 DDX3XO00571 662 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 KRT36O76013 467 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 PABPC4LP0CB38 370 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 FOXN2P32314 431 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 SMYD1Q8NB12 490 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 IRGQQ8WZA9 623 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 SLC35B4Q969S0 331 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 TUBGCP5Q96RT8 1024 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 SAR1AQ9NR31 198 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 METTL5Q9NRN9 209 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 KRT82Q9NSB4 513 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 NENFQ9UMX5 172 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 TTLL1O95922 423 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 H2AFZP0C0S5 128 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 ETS2P15036 469 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 YBX3P16989 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 ANXA13P27216 316 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 COPB2P35606 906 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF280AP59817 542 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 IL9RQ01113 521 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 CDR2Q01850 454 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 ACSBG2Q5FVE4 666 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 DCAF12L1Q5VU92 463 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 DSTYKQ6XUX3 929 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 H2AFVQ71UI9 128 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 MIGA2Q7L4E1 593 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 NME8Q8N427 588 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 ZNF653Q96CK0 615 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 PCDH18Q9HCL0 1135 aa12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-221ENST00000537934 FRMPD2Q68DX3 1309 aaPredicted RBP12.08□□□□□ -0.47
SEMA4D-221ENST00000537934 RAD21O60216 631 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 VAV1P15498 845 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 CHRNA3P32297 505 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 FAM47EQ6ZV65 393 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 SPATA24Q86W54 205 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 KBTBD2Q8IY47 623 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 ART4Q93070 314 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 MIPEPQ99797 713 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 CADM1Q9BY67 442 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 PAIP2BQ9ULR5 123 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 PCDHA3Q9Y5H8 950 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 ATP9BO43861 1147 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 LMNB1P20700 586 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 HPCAP84074 193 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 FKBP3Q00688 224 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 KLC3Q6P597 504 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 ADAT2Q7Z6V5 191 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 DNAAF5Q86Y56 855 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 ST13P4Q8IZP2 240 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 WDR60Q8WVS4 1066 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 CCDC17Q96LX7 622 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 CATSPER2Q96P56 530 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 PCYOX1Q9UHG3 505 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 PHTF1Q9UMS5 762 aa12.08□□□□□ -0.48
SEMA4D-221ENST00000537934 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 A0A0J9YVX5 310 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 PHF2O75151 1096 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 GH2P01242 217 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 TMEM259Q4ZIN3 620 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 ZNF554Q86TJ5 538 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 CLMNQ96JQ2 1002 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 UBA5Q9GZZ9 404 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 SBF1O95248 1867 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 CCDC194A0A1B0GVG4 234 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 CCDC22O60826 627 aa12.07□□□□□ -0.48
SEMA4D-221ENST00000537934 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms