RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 DCAF17Q5H9S7 520 aaPredicted RBP26.27■■□□□ 1.8
HMGA2-208ENST00000537429 GLRA4Q5JXX5 417 aa26.27■■□□□ 1.8
HMGA2-208ENST00000537429 TMCO2Q7Z6W1 182 aaPredicted RBP26.27■■□□□ 1.8
HMGA2-208ENST00000537429 NT5DC4Q86YG4 428 aa26.27■■□□□ 1.8
HMGA2-208ENST00000537429 WDR49Q8IV35 697 aa26.27■■□□□ 1.8
HMGA2-208ENST00000537429 RNPC3Q96LT9 517 aaKnown RBP26.27■■□□□ 1.8
HMGA2-208ENST00000537429 CGRRF1Q99675 332 aa26.27■■□□□ 1.8
HMGA2-208ENST00000537429 PLAGL2Q9UPG8 496 aa26.27■■□□□ 1.8
HMGA2-208ENST00000537429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.27■■□□□ 1.8
HMGA2-208ENST00000537429 PDE4DIPQ5VU43 2346 aa26.27■■□□□ 1.8
HMGA2-208ENST00000537429 NFICP08651 508 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 TRIM49P0CI25 452 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 TRIM49CP0CI26 452 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 TNNI1P19237 187 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 SCNN1GP51170 649 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 KRT31Q15323 416 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 SHHQ15465 462 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 TCERG1LQ5VWI1 586 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 APTXQ7Z2E3 356 aaKnown RBP26.26■■□□□ 1.79
HMGA2-208ENST00000537429 ABI1Q8IZP0 508 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 PHOSPHO2Q8TCD6 241 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 RSPH1Q8WYR4 309 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 ZNF516Q92618 1163 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 KIF12Q96FN5 646 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 CASD1Q96PB1 797 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 TMEM117Q9H0C3 514 aa26.26■■□□□ 1.79
HMGA2-208ENST00000537429 PDCD11Q14690 1871 aaKnown RBP26.26■■□□□ 1.79
HMGA2-208ENST00000537429 GATMP50440 423 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 TMEM132DQ14C87 1099 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 MAN2A1Q16706 1144 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 NOMO2Q5JPE7 1267 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 LMBRD2Q68DH5 695 aaPredicted RBP26.25■■□□□ 1.79
HMGA2-208ENST00000537429 ZNF689Q96CS4 500 aaPredicted RBP26.25■■□□□ 1.79
HMGA2-208ENST00000537429 PPP1R10Q96QC0 940 aaKnown RBP26.25■■□□□ 1.79
HMGA2-208ENST00000537429 SLC9A7Q96T83 725 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 INTS13Q9NVM9 706 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 INPP5FQ9Y2H2 1132 aa26.25■■□□□ 1.79
HMGA2-208ENST00000537429 THP07101 528 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 PPP3CAQ08209 521 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 NAB2Q15742 525 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 ANKRD20A12PQ8NF67 263 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 OR5B17Q8NGF7 314 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 KANSL3Q9P2N6 904 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 COL4A6Q14031 1691 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 FNDC1Q4ZHG4 1894 aaPredicted RBP26.24■■□□□ 1.79
HMGA2-208ENST00000537429 GJB5O95377 273 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 POMCP01189 267 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 PRKCSHP14314 528 aaPredicted RBP26.24■■□□□ 1.79
HMGA2-208ENST00000537429 ATP2A2P16615 1042 aaKnown RBP26.24■■□□□ 1.79
HMGA2-208ENST00000537429 GTF2H1P32780 548 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 TFAMQ00059 246 aaKnown RBP26.24■■□□□ 1.79
HMGA2-208ENST00000537429 KCNH2Q12809 1159 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 GRIK3Q13003 919 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 DUOXA2Q1HG44 320 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 MIIPQ5JXC2 388 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 URGCPQ8TCY9 931 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 FAM84AQ96KN4 292 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 ZBED2Q9BTP6 218 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 RC3H2Q9HBD1 1191 aaKnown RBP26.24■■□□□ 1.79
HMGA2-208ENST00000537429 TAB2Q9NYJ8 693 aa26.24■■□□□ 1.79
HMGA2-208ENST00000537429 BMP8BP34820 402 aa26.23■■□□□ 1.79
HMGA2-208ENST00000537429 AP3M2P53677 418 aa26.23■■□□□ 1.79
HMGA2-208ENST00000537429 VWA3BQ502W6 1294 aa26.23■■□□□ 1.79
HMGA2-208ENST00000537429 CACTINQ8WUQ7 758 aaKnown RBP26.23■■□□□ 1.79
HMGA2-208ENST00000537429 UBQLN1Q9UMX0 589 aaKnown RBP26.23■■□□□ 1.79
HMGA2-208ENST00000537429 TDRD15B5MCY1 1934 aaKnown RBP26.23■■□□□ 1.79
HMGA2-208ENST00000537429 LAMA2P24043 3122 aaKnown RBP26.22■■□□□ 1.79
HMGA2-208ENST00000537429 TBKBP1A7MCY6 615 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 STX10O60499 249 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 AFPP02771 609 aaKnown RBP26.22■■□□□ 1.79
HMGA2-208ENST00000537429 C4BPAP04003 597 aaKnown RBP26.22■■□□□ 1.79
HMGA2-208ENST00000537429 GCLMP48507 274 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 COPB1P53618 953 aaKnown RBP26.22■■□□□ 1.79
HMGA2-208ENST00000537429 C15orf39Q6ZRI6 1047 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 SV2AQ7L0J3 742 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 HERC6Q8IVU3 1022 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 C18orf25Q96B23 403 aaPredicted RBP26.22■■□□□ 1.79
HMGA2-208ENST00000537429 ANKRD36BP1Q96IX9 119 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 MTMR12Q9C0I1 747 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 VPS16Q9H269 839 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 TMEM8AQ9HCN3 771 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 SLC38A7Q9NVC3 462 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 TBC1D13Q9NVG8 400 aa26.22■■□□□ 1.79
HMGA2-208ENST00000537429 XPOTO43592 962 aaKnown RBP26.21■■□□□ 1.79
HMGA2-208ENST00000537429 TMEM191BP0C7N4 346 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 HTRA4P83105 476 aaPredicted RBP26.21■■□□□ 1.79
HMGA2-208ENST00000537429 ZACNQ401N2 412 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 CBWD6Q4V339 395 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 CBWD3Q5JTY5 395 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 CBWD5Q5RIA9 395 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 MRPL9Q9BYD2 267 aaKnown RBP26.21■■□□□ 1.79
HMGA2-208ENST00000537429 NDST4Q9H3R1 872 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 MMRN2Q9H8L6 949 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 TUBGCP4Q9UGJ1 667 aa26.21■■□□□ 1.79
HMGA2-208ENST00000537429 CYP3A5P20815 502 aa26.2■■□□□ 1.79
HMGA2-208ENST00000537429 FMO5P49326 533 aa26.2■■□□□ 1.79
HMGA2-208ENST00000537429 FANCCQ00597 558 aa26.2■■□□□ 1.79
HMGA2-208ENST00000537429 SOX4Q06945 474 aaPredicted RBP26.2■■□□□ 1.79
HMGA2-208ENST00000537429 UVSSAQ2YD98 709 aa26.2■■□□□ 1.79
HMGA2-208ENST00000537429 TRAPPC11Q7Z392 1133 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms