RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TBCAO75347 108 aaKnown RBP19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 WEE2P0C1S8 567 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CLCNKBP51801 687 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 UPP1Q16831 310 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CD300LGQ6UXG3 332 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 DYMQ7RTS9 669 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RIN2Q8WYP3 895 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 RPGRIP1Q96KN7 1286 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 POMKQ9H5K3 350 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 CNTN3Q9P232 1028 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 TBX20Q9UMR3 447 aa19.52■□□□□ 0.72
TNFRSF1A-209ENST00000536717 MYMKA6NI61 221 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TMEM189-UBE2V1I3L0A0 370 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 DCXO43602 365 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PIGRP01833 764 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ALADP13716 330 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 KCNE1P15382 129 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SCP2P22307 547 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 NMT1P30419 496 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GTF2BQ00403 316 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SLC10A6Q3KNW5 377 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 AXDND1Q5T1B0 1012 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FAM171A1Q5VUB5 890 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PRSS55Q6UWB4 352 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 C3orf58Q8NDZ4 430 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 DDX12PQ92771 950 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 BICD1Q96G01 975 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SFXN1Q9H9B4 322 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FNIP2Q9P278 1114 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MUTYHQ9UIF7 546 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 HNRNPDLO14979 420 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 RPL17P18621 184 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ADALQ6DHV7 355 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TMC5Q6UXY8 1006 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CCDC73Q6ZRK6 1079 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SV2BQ7L1I2 683 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 DNAJC19Q96DA6 116 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 UROC1Q96N76 676 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 NECTIN4Q96NY8 510 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TTPALQ9BTX7 342 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PANK2Q9BZ23 570 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MAN1C1Q9NR34 630 aa19.51■□□□□ 0.71
TNFRSF1A-209ENST00000536717 B3GAT3O94766 335 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GLUD1P00367 558 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MTHFRP42898 656 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 LIG4P49917 911 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ELAVL2Q12926 359 aaKnown RBP19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SLC39A4Q6P5W5 647 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 DCLRE1AQ6PJP8 1040 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SFR1Q86XK3 245 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MAP4K3Q8IVH8 894 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GLYCTKQ8IVS8 523 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 LNX1Q8TBB1 728 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PIK3R5Q8WYR1 880 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GBP4Q96PP9 640 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ST6GALNAC4Q9H4F1 302 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SLC38A7Q9NVC3 462 aa19.5■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GOLGA6L4A6NEF3 574 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FAM86C2PA6NEL3 165 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FAM189A1O60320 539 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GPR37L1O60883 481 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CXCL8P10145 99 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SP100P23497 879 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TNFSF9P41273 254 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 STAT6P42226 847 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MATR3P43243 847 aaKnown RBP eCLIP19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ZC2HC1CQ53FD0 456 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 HERC4Q5GLZ8 1057 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CLEC17AQ6ZS10 378 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 GPR149Q86SP6 731 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CEP57Q86XR8 500 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PALB2Q86YC2 1186 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PDILTQ8N807 584 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 C18orf25Q96B23 403 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 RIPOR3Q96MK2 946 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 LRFN3Q9BTN0 628 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FAM13BQ9NYF5 915 aa19.49■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TGM5O43548 720 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PPP1R37O75864 691 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PSMD5Q16401 504 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TMEM31Q5JXX7 168 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ATAT1Q5SQI0 421 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ZBTB41Q5SVQ8 909 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 LILRA6Q6PI73 481 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SHC4Q6S5L8 630 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ZNF720Q7Z2F6 126 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CLSTN3Q9BQT9 956 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SCN1AP35498 2009 aa19.48■□□□□ 0.71
TNFRSF1A-209ENST00000536717 TTC26A0AVF1 554 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 PODXLO00592 558 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 C1RP00736 705 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 CLTAP09496 248 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 SPATA31D3P0C874 917 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 MYBP10242 640 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 FGFR3P22607 806 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 ABCD1P33897 745 aa19.47■□□□□ 0.71
TNFRSF1A-209ENST00000536717 BRCC3P46736 316 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms