RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 WDR66Q8TBY9 1149 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 UIMC1Q96RL1 719 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 SPC25Q9HBM1 224 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 ING3Q9NXR8 418 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 TRPM1Q7Z4N2 1603 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 CPSF1Q10570 1443 aaKnown RBP7.26□□□□□ -1.25
CLIP1-207ENST00000536634 PPIP5K1Q6PFW1 1433 aa7.26□□□□□ -1.25
CLIP1-207ENST00000536634 MUSKO15146 869 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 JUNP05412 331 aaKnown RBP7.25□□□□□ -1.25
CLIP1-207ENST00000536634 GPR15P49685 360 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 LGALS4P56470 323 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 MGAT5Q09328 741 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 MAMDC4Q6UXC1 1216 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 MSL3Q8N5Y2 521 aaKnown RBP7.25□□□□□ -1.25
CLIP1-207ENST00000536634 ATL2Q8NHH9 583 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 EDAQ92838 391 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 IL23AQ9NPF7 189 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 SH3BP1Q9Y3L3 701 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 ABCC6O95255 1503 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 PNPLA7Q6ZV29 1317 aa7.25□□□□□ -1.25
CLIP1-207ENST00000536634 ADCY9O60503 1353 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 A0A1W2PR48 441 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 C1QTNF3-AMACRE9PGA6 284 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 CPEP16870 476 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 ENPP1P22413 925 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 UGT8Q16880 541 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 CCDC178Q5BJE1 867 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 SPDYAQ5MJ70 313 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 OR14C36Q8NHC7 312 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 TGFBRAP1Q8WUH2 860 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 ACAP3Q96P50 834 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 C14orf119Q9NWQ9 140 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 NCDNQ9UBB6 729 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 HECAQ9UBI9 543 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-207ENST00000536634 CDY2AQ9Y6F7 541 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 USP6P35125 1406 aa7.24□□□□□ -1.25
CLIP1-207ENST00000536634 BRD4O60885 1362 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 NFAT5O94916 1531 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 QRICH2Q9H0J4 1663 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 GOLGA8AA7E2F4 631 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 EXOC5O00471 708 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 NRP2O60462 931 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 ALDH1A2O94788 518 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 XPAP23025 273 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 SCAND1P57086 179 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 SPTY2D1Q68D10 685 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 SPRED1Q7Z699 444 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 DDX42Q86XP3 938 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 D2HGDHQ8N465 521 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 LMBR1Q8WVP7 490 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 CDK5RAP1Q96SZ6 601 aaKnown RBP7.23□□□□□ -1.25
CLIP1-207ENST00000536634 TMX1Q9H3N1 280 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 TLR9Q9NR96 1032 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 RCAN3Q9UKA8 241 aa7.23□□□□□ -1.25
CLIP1-207ENST00000536634 MTSS1O43312 755 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 TMEM127O75204 238 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 NRG3P56975 720 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 PUM1Q14671 1186 aaKnown RBP eCLIP7.22□□□□□ -1.255e-6■□□□□ 10.2
CLIP1-207ENST00000536634 PRKD1Q15139 912 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-207ENST00000536634 RNF187Q5TA31 235 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-207ENST00000536634 LMBR1LQ6UX01 489 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 ARHGEF25Q86VW2 580 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 RSAD2Q8WXG1 361 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 FAM89AQ96GI7 184 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 AHCYL2Q96HN2 611 aaKnown RBP7.22□□□□□ -1.25
CLIP1-207ENST00000536634 TCF25Q9BQ70 676 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 QRSL1Q9H0R6 528 aaKnown RBP7.22□□□□□ -1.25
CLIP1-207ENST00000536634 DPP7Q9UHL4 492 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 TESMINQ9Y4I5 508 aa7.22□□□□□ -1.25
CLIP1-207ENST00000536634 STC2O76061 302 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 CFBP00751 764 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 ZXDCQ2QGD7 858 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-207ENST00000536634 RNF219Q5W0B1 726 aaPredicted RBP7.21□□□□□ -1.26
CLIP1-207ENST00000536634 FAM111BQ6SJ93 734 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 TAS1R1Q7RTX1 841 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 GLB1L2Q8IW92 636 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 CMTM4Q8IZR5 234 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 MYRFQ9Y2G1 1151 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 LY75O60449 1722 aa7.21□□□□□ -1.26
CLIP1-207ENST00000536634 CCDC7Q96M83 1385 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 CAPN14A8MX76 684 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 MATN3O15232 486 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 GPR3P46089 330 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 ERVK-21P61565 698 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 CDK17Q00537 523 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 SPIDRQ14159 915 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 UBE3CQ15386 1083 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 SGMS1Q86VZ5 419 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 TSPEARQ8WU66 669 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 ENKD1Q9H0I2 346 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 MCM8Q9UJA3 840 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 ATP8A1Q9Y2Q0 1164 aa7.2□□□□□ -1.26
CLIP1-207ENST00000536634 DOT1LQ8TEK3 1739 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 KIAA1210Q9ULL0 1709 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 TNFRSF1AP19438 455 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 CASRP41180 1078 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms