RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ETS2P15036 469 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 GM2AP17900 193 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 CYP2J2P51589 502 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 MRPS9P82933 396 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 EDRF1Q3B7T1 1238 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 ASRGL1Q7L266 308 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 DAAM2Q86T65 1068 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 FAM133AQ8N9E0 248 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 LPAR1Q92633 364 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 DDX50Q9BQ39 737 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 SLC38A10Q9HBR0 1119 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 DMAP1Q9NPF5 467 aaPredicted RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 LUC7LQ9NQ29 371 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 ATXN10Q9UBB4 475 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 PHF24Q9UPV7 400 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 ARL2BPQ9Y2Y0 163 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 SLC26A4O43511 780 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 XRCC5P13010 732 aaKnown RBP14.9□□□□□ -0.02
LIG1-203ENST00000536218 ACADSP16219 412 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 HSD17B4P51659 736 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 SP4Q02446 784 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 MCL1Q07820 350 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 EPHA7Q15375 998 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 SFMBT2Q5VUG0 894 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 NLGN2Q8NFZ4 835 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 RMDN3Q96TC7 470 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 RXFP1Q9HBX9 757 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 KCNK9Q9NPC2 374 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 NOC2LQ9Y3T9 749 aaKnown RBP14.9□□□□□ -0.02
LIG1-203ENST00000536218 ZNF541Q9H0D2 1346 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 PGRMC1O00264 195 aaKnown RBP14.9□□□□□ -0.02
LIG1-203ENST00000536218 ATP9AO75110 1047 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 ZBED4O75132 1171 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 FAM200BP0CF97 657 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 DESP17661 470 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 MTMR1Q13613 665 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 TKFCQ3LXA3 575 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 EPM2AIP1Q7L775 607 aaPredicted RBP14.9□□□□□ -0.02
LIG1-203ENST00000536218 NEK9Q8TD19 979 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 EPS8L3Q8TE67 593 aaKnown RBP14.9□□□□□ -0.02
LIG1-203ENST00000536218 TRAPPC9Q96Q05 1148 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 TYW1Q9NV66 732 aaKnown RBP14.9□□□□□ -0.02
LIG1-203ENST00000536218 KLHL14Q9P2G3 628 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 PPP1R9AQ9ULJ8 1098 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 TRAF3IP3Q9Y228 551 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 ASTN1O14525 1302 aa14.9□□□□□ -0.02
LIG1-203ENST00000536218 PDXKO00764 312 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 TLR2O60603 784 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 LCA5LO95447 670 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 UBTFL6P0CB48 400 aaPredicted RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 TARSP26639 723 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 PLTPP55058 493 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 SLC29A2Q14542 456 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 NAB2Q15742 525 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 IRGCQ6NXR0 463 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 ZNF449Q6P9G9 518 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 MCF2L2Q86YR7 1114 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 ASAP3Q8TDY4 903 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 VCX3BQ9H321 246 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 VCX3AQ9NNX9 186 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 METTL5Q9NRN9 209 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 TCEAL9Q9UHQ7 104 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 LNPEPQ9UIQ6 1025 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 INTUQ9ULD6 942 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 TGFB1I1O43294 461 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 ZCCHC18P0CG32 403 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 RPS12P25398 132 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 HNRNPH3P31942 346 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 BAATQ14032 418 aaPredicted RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 SLC9C1Q4G0N8 1177 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 TRPM4Q8TD43 1214 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 NMRK1Q9NWW6 199 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 CEP72Q9P209 647 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 ADAMTS1Q9UHI8 967 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 HAO1Q9UJM8 370 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 ZNF189O75820 626 aaPredicted RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 USP46P62068 366 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 PRPF4BQ13523 1007 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 ARHGEF16Q5VV41 709 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 RNF207Q6ZRF8 634 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 INTS8Q75QN2 995 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 LCA5Q86VQ0 697 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 EIF1ADQ8N9N8 165 aaKnown RBP14.89□□□□□ -0.03
LIG1-203ENST00000536218 FAM13CQ8NE31 585 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 TMEM59LQ9UK28 342 aa14.89□□□□□ -0.03
LIG1-203ENST00000536218 WFS1O76024 890 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 AFPP02771 609 aaKnown RBP14.88□□□□□ -0.03
LIG1-203ENST00000536218 HOXA7P31268 230 aaPredicted RBP14.88□□□□□ -0.03
LIG1-203ENST00000536218 PMS2P54278 862 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 CNGA2Q16280 664 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 GJB7Q6PEY0 223 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 PADI6Q6TGC4 694 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.88□□□□□ -0.03
LIG1-203ENST00000536218 RBBP8NLQ8NC74 664 aaPredicted RBP14.88□□□□□ -0.03
LIG1-203ENST00000536218 SCFD2Q8WU76 684 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 CARD9Q9H257 536 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 CTTNBP2NLQ9P2B4 639 aa14.88□□□□□ -0.03
LIG1-203ENST00000536218 PSME4Q14997 1843 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms