RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 RAB34Q9BZG1 259 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 CDT1Q9H211 546 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 TBC1D17Q9HA65 648 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 DNM3Q9UQ16 869 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 STK24Q9Y6E0 443 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 PHLPP2Q6ZVD8 1323 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 SMIM28A0A1B0GU29 152 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 I3L4J1 428 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 TKTP29401 623 aaKnown RBP22.61■■□□□ 1.21
LTBR-205ENST00000535739 HOXA9P31269 272 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 SOX4Q06945 474 aaPredicted RBP22.61■■□□□ 1.21
LTBR-205ENST00000535739 PARM1Q6UWI2 310 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 TAS1R3Q7RTX0 852 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 FGF14Q92915 247 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 RUSC1Q9BVN2 902 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 PTPRHQ9HD43 1115 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 MTRRQ9UBK8 725 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 CDH7Q9ULB5 785 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 CDY1Q9Y6F8 540 aa22.61■■□□□ 1.21
LTBR-205ENST00000535739 ZFP37Q9Y6Q3 630 aaPredicted RBP22.61■■□□□ 1.21
LTBR-205ENST00000535739 CACNA1IQ9P0X4 2223 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 XYLBO75191 536 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 GRM5P41594 1212 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 BRCC3P46736 316 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 ZNF568Q3ZCX4 644 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 KRT79Q5XKE5 535 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 RINT1Q6NUQ1 792 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 KCNK18Q7Z418 384 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 ITFG1Q8TB96 612 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 UROC1Q96N76 676 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 MMTAG2Q9BU76 263 aaKnown RBP22.6■■□□□ 1.21
LTBR-205ENST00000535739 CCDC94Q9BW85 323 aaPredicted RBP22.6■■□□□ 1.21
LTBR-205ENST00000535739 TARS2Q9BW92 718 aaKnown RBP22.6■■□□□ 1.21
LTBR-205ENST00000535739 TMEM134Q9H6X4 195 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 HCFC1R1Q9NWW0 138 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 ARHGAP28Q9P2N2 729 aa22.6■■□□□ 1.21
LTBR-205ENST00000535739 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
LTBR-205ENST00000535739 YARSP54577 528 aaKnown RBP22.59■■□□□ 1.21
LTBR-205ENST00000535739 MAPK7Q13164 816 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 DMP1Q13316 513 aaPredicted RBP22.59■■□□□ 1.21
LTBR-205ENST00000535739 UVSSAQ2YD98 709 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 XKR4Q5GH76 650 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 ALKAL1Q6UXT8 129 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 FGF13Q92913 245 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 NKD2Q969F2 451 aaPredicted RBP22.59■■□□□ 1.21
LTBR-205ENST00000535739 DDX27Q96GQ7 796 aaKnown RBP22.59■■□□□ 1.21
LTBR-205ENST00000535739 MRPL4Q9BYD3 311 aaKnown RBP22.59■■□□□ 1.21
LTBR-205ENST00000535739 KMT5AQ9NQR1 393 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 ARHGEF3Q9NR81 526 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 SLC2A4RGQ9NR83 387 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 PDCD11Q14690 1871 aaKnown RBP22.59■■□□□ 1.21
LTBR-205ENST00000535739 MIA3Q5JRA6 1907 aa22.59■■□□□ 1.21
LTBR-205ENST00000535739 GVINP1Q7Z2Y8 2422 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 SFI1A8K8P3 1242 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 LAD1O00515 517 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 TRAPPC3O43617 180 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 GPC5P78333 572 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 SPECC1Q5M775 1068 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 DTHD1Q6ZMT9 781 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 C1orf186Q6ZWK4 172 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 DRC1Q96MC2 740 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 ZMAT2Q96NC0 199 aaKnown RBP22.58■■□□□ 1.21
LTBR-205ENST00000535739 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.58■■□□□ 1.21
LTBR-205ENST00000535739 TOPORSQ9NS56 1045 aaPredicted RBP22.58■■□□□ 1.21
LTBR-205ENST00000535739 DNMT3BQ9UBC3 853 aaKnown RBP22.58■■□□□ 1.21
LTBR-205ENST00000535739 BACE2Q9Y5Z0 518 aa22.58■■□□□ 1.21
LTBR-205ENST00000535739 FRYLO94915 3013 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 SLC16A4O15374 487 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 DCNP07585 359 aaKnown RBP22.57■■□□□ 1.2
LTBR-205ENST00000535739 PRPHP41219 470 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 ZRSR1Q15695 479 aaKnown RBP22.57■■□□□ 1.2
LTBR-205ENST00000535739 PHLDB3Q6NSJ2 640 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 ANKS3Q6ZW76 656 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 ACAP3Q96P50 834 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 TCHPQ9BT92 498 aa22.57■■□□□ 1.2
LTBR-205ENST00000535739 COL4A3Q01955 1670 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 EP300Q09472 2414 aaPredicted RBP22.56■■□□□ 1.2
LTBR-205ENST00000535739 PODXLO00592 558 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 ABLIM1O14639 778 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 POU2F2P09086 479 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 MCF2P10911 925 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 PROZP22891 400 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 RAD51AP2Q09MP3 1159 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 C8orf34Q49A92 452 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 PABPC1LQ4VXU2 614 aaKnown RBP22.56■■□□□ 1.2
LTBR-205ENST00000535739 MCTP1Q6DN14 999 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 ZBTB45Q96K62 511 aaPredicted RBP22.56■■□□□ 1.2
LTBR-205ENST00000535739 SNX27Q96L92 541 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 SLC38A7Q9NVC3 462 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 SIT1Q9Y3P8 196 aa22.56■■□□□ 1.2
LTBR-205ENST00000535739 RBM19Q9Y4C8 960 aaKnown RBP22.56■■□□□ 1.2
LTBR-205ENST00000535739 MEFVO15553 781 aaPredicted RBP22.55■■□□□ 1.2
LTBR-205ENST00000535739 HARSP12081 509 aaKnown RBP22.55■■□□□ 1.2
LTBR-205ENST00000535739 MPZL3Q6UWV2 235 aa22.55■■□□□ 1.2
LTBR-205ENST00000535739 MTSS1LQ765P7 747 aa22.55■■□□□ 1.2
LTBR-205ENST00000535739 ING5Q8WYH8 240 aa22.55■■□□□ 1.2
LTBR-205ENST00000535739 C18orf25Q96B23 403 aaPredicted RBP22.55■■□□□ 1.2
LTBR-205ENST00000535739 FOXQ1Q9C009 403 aa22.55■■□□□ 1.2
LTBR-205ENST00000535739 C17orf75Q9HAS0 396 aa22.55■■□□□ 1.2
LTBR-205ENST00000535739 ZNF292O60281 2723 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms