RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TNNI1P19237 187 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 CDK11BP21127 795 aaKnown RBP16.88■□□□□ 0.29
CNN1-202ENST00000535659 DLG4P78352 724 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 CLDN10P78369 228 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 HTRA4P83105 476 aaPredicted RBP16.88■□□□□ 0.29
CNN1-202ENST00000535659 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 CACTINQ8WUQ7 758 aaKnown RBP16.88■□□□□ 0.29
CNN1-202ENST00000535659 KIF12Q96FN5 646 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
CNN1-202ENST00000535659 PPP1R10Q96QC0 940 aaKnown RBP16.88■□□□□ 0.29
CNN1-202ENST00000535659 RAD9AQ99638 391 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
CNN1-202ENST00000535659 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 GOLGA6L19H0YKK7 550 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 ZNF18P17022 549 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 EEF1GP26641 437 aaKnown RBP16.87■□□□□ 0.29
CNN1-202ENST00000535659 TPM4P67936 248 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 KCNJ12Q14500 433 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 DUOXA2Q1HG44 320 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 TCP11X2Q5H9J9 407 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 GLRA4Q5JXX5 417 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 WDR49Q8IV35 697 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 TRIM59Q8IWR1 403 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 TDHQ8IZJ6 230 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 YME1L1Q96TA2 773 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 MRPL9Q9BYD2 267 aaKnown RBP16.87■□□□□ 0.29
CNN1-202ENST00000535659 PRO3102Q9H379 93 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 RC3H2Q9HBD1 1191 aaKnown RBP16.87■□□□□ 0.29
CNN1-202ENST00000535659 SLC38A7Q9NVC3 462 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 TBC1D13Q9NVG8 400 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 INTS13Q9NVM9 706 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 PLAGL2Q9UPG8 496 aa16.87■□□□□ 0.29
CNN1-202ENST00000535659 LAMA2P24043 3122 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 XPOTO43592 962 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 TLL1O43897 1013 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 NFICP08651 508 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 CYP3A5P20815 502 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 MTIF2P46199 727 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 AP3M2P53677 418 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 TFAMQ00059 246 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 RNASELQ05823 741 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 GRIK3Q13003 919 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 NAB2Q15742 525 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 PAN2Q504Q3 1202 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 TCERG1LQ5VWI1 586 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 EFCAB13Q8IY85 973 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 CMTR2Q8IYT2 770 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 RNF214Q8ND24 703 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 ZNF516Q92618 1163 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 SLC35C1Q96A29 364 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 FAM193BQ96PV7 902 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 CGRRF1Q99675 332 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.86■□□□□ 0.29
CNN1-202ENST00000535659 TRIOBPQ9H2D6 2365 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 GRXCR1A8MXD5 290 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 STX10O60499 249 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 DDHD2O94830 711 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 BTG3Q14201 252 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 ZNF280BQ86YH2 543 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 BEST2Q8NFU1 509 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 OR5B17Q8NGF7 314 aa16.86■□□□□ 0.29
CNN1-202ENST00000535659 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.86■□□□□ 0.29
CNN1-202ENST00000535659 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
CNN1-202ENST00000535659 PTPRSQ13332 1948 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 LRRC10BA6NIK2 292 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 TNNC2P02585 160 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 C4BPAP04003 597 aaKnown RBP16.85■□□□□ 0.29
CNN1-202ENST00000535659 TRIM49P0CI25 452 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 TRIM49CP0CI26 452 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 GTF2H1P32780 548 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 PPP3CAQ08209 521 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 TUSC3Q13454 348 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 DCAF17Q5H9S7 520 aaPredicted RBP16.85■□□□□ 0.29
CNN1-202ENST00000535659 FAM109BQ6ICB4 259 aaPredicted RBP16.85■□□□□ 0.29
CNN1-202ENST00000535659 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 ANKRD36BP1Q96IX9 119 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 TUBGCP2Q9BSJ2 902 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 RBSNQ9H1K0 784 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 DPP3Q9NY33 737 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
CNN1-202ENST00000535659 PTPRJQ12913 1337 aa16.85■□□□□ 0.29
CNN1-202ENST00000535659 ALDH2P05091 517 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 TMEM191BP0C7N4 346 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 GCLMP48507 274 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 RABGGTBP53611 331 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
CNN1-202ENST00000535659 DSC1Q08554 894 aa16.84■□□□□ 0.29
CNN1-202ENST00000535659 KCNH2Q12809 1159 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms