RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 GBP4Q96PP9 640 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 MED15Q96RN5 788 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 ADPGKQ9BRR6 497 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 MSTO1Q9BUK6 570 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 ALG13Q9NP73 1137 aaKnown RBP14.29□□□□□ -0.12
CHFR-210ENST00000535527 CNTN3Q9P232 1028 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
CHFR-210ENST00000535527 TRIM49BA6NDI0 452 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 LACTBL1A8MY62 500 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 PPEF2O14830 753 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 HOXA2O43364 376 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHFR-210ENST00000535527 GALTP07902 379 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 NFICP08651 508 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 MCM4P33991 863 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 IRS1P35568 1242 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 PRCPP42785 496 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 BCAR1P56945 870 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 ALCAMQ13740 583 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 MORC3Q14149 939 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 PTPROQ16827 1216 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 CBWD2Q8IUF1 395 aa14.28□□□□□ -0.12
CHFR-210ENST00000535527 MRPL38Q96DV4 380 aaKnown RBP14.28□□□□□ -0.12
CHFR-210ENST00000535527 AGO2Q9UKV8 859 aaKnown RBP14.28□□□□□ -0.12
CHFR-210ENST00000535527 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 CASP4P49662 377 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 NCBP1Q09161 790 aaKnown RBP14.27□□□□□ -0.13
CHFR-210ENST00000535527 GRIK3Q13003 919 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 ZBTB6Q15916 424 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 KNOP1Q1ED39 458 aaKnown RBP14.27□□□□□ -0.13
CHFR-210ENST00000535527 KANK3Q6NY19 840 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 ABI1Q8IZP0 508 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 FBXO22Q8NEZ5 403 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 SPPL3Q8TCT6 385 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 POMGNT1Q8WZA1 660 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 SMARCE1Q969G3 411 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 HSPBP1Q9NZL4 362 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.13
CHFR-210ENST00000535527 PPP1R3GB7ZBB8 358 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 H3BNC9 293 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 NRP1O14786 923 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 KIF4AO95239 1232 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 CLTAP09496 248 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 KCNE1P15382 129 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 GARTP22102 1010 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 SCP2P22307 547 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHFR-210ENST00000535527 PSMD2Q13200 908 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
CHFR-210ENST00000535527 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 BRSK2Q8IWQ3 736 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
CHFR-210ENST00000535527 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 GUF1Q8N442 669 aaKnown RBP14.26□□□□□ -0.13
CHFR-210ENST00000535527 HASPINQ8TF76 798 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 GSDMAQ96QA5 445 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 FAM213AQ9BRX8 229 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
CHFR-210ENST00000535527 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
CHFR-210ENST00000535527 TMEM206Q9H813 350 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 DMAC2Q9NW81 257 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 TMEM63CQ9P1W3 806 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
CHFR-210ENST00000535527 TRIOO75962 3097 aa14.26□□□□□ -0.13
CHFR-210ENST00000535527 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 NCK2O43639 380 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 FGF18O76093 207 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 LAG3P18627 525 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 CYP2J2P51589 502 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 ERVFC1P60507 584 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 ZP2Q05996 745 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 GPM6BQ13491 265 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 COL19A1Q14993 1142 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 TIGD5Q53EQ6 642 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 LMBRD2Q68DH5 695 aaPredicted RBP14.25□□□□□ -0.13
CHFR-210ENST00000535527 JADE1Q6IE81 842 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 RBM43Q6ZSC3 357 aaKnown RBP14.25□□□□□ -0.13
CHFR-210ENST00000535527 TAS1R1Q7RTX1 841 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 ADGRD2Q7Z7M1 963 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 ADHFE1Q8IWW8 467 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 C12orf56Q8IXR9 622 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 ADSSL1Q8N142 457 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 URGCPQ8TCY9 931 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 PABPC5Q96DU9 382 aaKnown RBP14.25□□□□□ -0.13
CHFR-210ENST00000535527 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 B3GALT6Q96L58 329 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 ZNF558Q96NG5 402 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 TOPORSQ9NS56 1045 aaPredicted RBP14.25□□□□□ -0.13
CHFR-210ENST00000535527 KIAA1468Q9P260 1216 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 EXOC7Q9UPT5 735 aa14.25□□□□□ -0.13
CHFR-210ENST00000535527 USP34Q70CQ2 3546 aa14.24□□□□□ -0.13
CHFR-210ENST00000535527 C2orf16Q68DN1 1984 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms