RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 HADHBP55084 474 aaKnown RBP14.28□□□□□ -0.12
HDAC4-214ENST00000535493 MTFR1Q15390 333 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 SLC15A2Q16348 729 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 ATP13A4Q4VNC1 1196 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 INTS8Q75QN2 995 aaKnown RBP14.28□□□□□ -0.12
HDAC4-214ENST00000535493 PASD1Q8IV76 773 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 FAM71AQ8IYT1 594 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 SUPT20HQ8NEM7 779 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 TAS1R2Q8TE23 839 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 MKL1Q969V6 931 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 NACC1Q96RE7 527 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 KIF13BQ9NQT8 1826 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC4-214ENST00000535493 CFHP08603 1231 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 TUBP50607 506 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 RAD23BP54727 409 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 ZFYVE27Q5T4F4 411 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 THEMIS2Q5TEJ8 643 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 MIS18BP1Q6P0N0 1132 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 GSTA5Q7RTV2 222 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 GBP7Q8N8V2 638 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-214ENST00000535493 POMGNT1Q8WZA1 660 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
HDAC4-214ENST00000535493 WHRNQ9P202 907 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 PHTF1Q9UMS5 762 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 FSCN2O14926 492 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 FGFR1P11362 822 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 ITIH2P19823 946 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 PEX3P56589 373 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 ABCB5Q2M3G0 1257 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 ACER1Q8TDN7 264 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 HAUS1Q96CS2 278 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 MAGEB18Q96M61 343 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 C8orf37Q96NL8 207 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 PLCD4Q9BRC7 762 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 TUFT1Q9NNX1 390 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.12
HDAC4-214ENST00000535493 GOLGA8SH3BPF8 625 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 GOLGA8MH3BSY2 632 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 IPO5O00410 1097 aaKnown RBP14.27□□□□□ -0.13
HDAC4-214ENST00000535493 GGPS1O95749 300 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 KRT10P13645 584 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 GBP1P32455 592 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 RPA3P35244 121 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-214ENST00000535493 CRY2Q49AN0 593 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 CEP55Q53EZ4 464 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 ARHGEF18Q6ZSZ5 1173 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 STXBP4Q6ZWJ1 553 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 CROCCP2Q86T23 111 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 ACSF2Q96CM8 615 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-214ENST00000535493 ZBTB10Q96DT7 871 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 NAF1Q96HR8 494 aaKnown RBP14.27□□□□□ -0.13
HDAC4-214ENST00000535493 CCDC17Q96LX7 622 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 RBM15Q96T37 977 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDAC4-214ENST00000535493 NYAP2Q9P242 653 aa14.27□□□□□ -0.13
HDAC4-214ENST00000535493 A0A1W2PPM1 405 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 CYP1A2P05177 515 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 KRT15P19012 456 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 OVGP1Q12889 678 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 CLUL1Q15846 466 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 PKN2Q16513 984 aaKnown RBP14.26□□□□□ -0.13
HDAC4-214ENST00000535493 P3H1Q32P28 736 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 LONP2Q86WA8 852 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 FAM13CQ8NE31 585 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 ZNF483Q8TF39 744 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-214ENST00000535493 LRRC37BQ96QE4 947 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 OSBPL1AQ9BXW6 950 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 DCLK3Q9C098 648 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-214ENST00000535493 SAYSD1Q9NPB0 183 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 DCTN4Q9UJW0 460 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 GTF3C4Q9UKN8 822 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 EXOC1LA0A1B0GW35 172 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 CCNB1P14635 433 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 ZNF365Q70YC5 407 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 FBF1Q8TES7 1133 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 PARD3BQ8TEW8 1205 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 NUDCD1Q96RS6 583 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
HDAC4-214ENST00000535493 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 C10orf88Q9H8K7 445 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
HDAC4-214ENST00000535493 GRIN3BO60391 1043 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 CDH16O75309 829 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 BBOX1O75936 387 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 T-ENOLP0DO92 83 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 GZMAP12544 262 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 TCF4P15884 667 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 ADSSP30520 456 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 PPP2R5CQ13362 524 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 HAUS6Q7Z4H7 955 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 TRAIPQ9BWF2 469 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 WDR11Q9BZH6 1224 aa14.25□□□□□ -0.13
HDAC4-214ENST00000535493 PI4KBQ9UBF8 816 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms